| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3598 |
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| Symbol | |
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| ID | 6179156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 538108 |
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| End bp | 539640 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683368 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001810281 |
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| Protein GI | 172062630 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAT ACCCGCTGCC CGCTACTCTG CGCCGCCATA CCGTGTCGGC CGTGGCCCGC
ATTCTGTCGC CCCGCGGCGT ACTCGTCGCG GGCATCGTGC TGTTGCTGCT CAGTTGGGGA
TTCTCGACGT CGCTTTTAAT CGAGGCACGC CACGACGCGT ACGGCCATTC GGTCGAAAAT
GCGCGCAATC TGATGCTGCT GATCGAGCGC GATATTTCCC GCAATATCGA ACTGTATGAT
CTGTCACTGC AAAACGTCGT CGACGGTCTC TCCGATCCGG AACTAATGGC ATTGCCGCCG
CGCCAGCGTC ACCGGCTGCT GTTCGACCGC GCCGCGACCG GCGCGTATCT CGGCGCCATT
TTCGTGATGG ACCCGCACGG CAATATCGTG ATCGATTCGG CCACGTCGCC GCCGCGGCAA
GGCAATTTCG CCGATCGCGA CTATTTCACC GTGCATCGCG ACCGGCTTGC GCCGGGCCTC
TACATCAGCC GACCCTATGC GTCCAGGCTG CGCGGCGGCG CACTGACGAT CGCGCTCAGC
CGCCGGATCG TCAAGGCCGA CGGCACGTTC GGCGGCATCG TCGTCGGCAC GCTGAACATC
GACTACTTCC GCGCGCTGCT CGACGGGCTC GCCGTCGGCA AGCACGGCAG CGCCGCGGTC
ATCGAGGACA ACGGGGCGCT CGTGTCCCGC CTGCCGTACG ACGCGCGCGT GGTCGGCCTC
GATCTGCACG ACTCCCCGCT CTTCATCGAG TCGCAGCGCC GCAGCGAAGG CGCGCTCACG
GGCGTCGGCG CGATCGACGG CGTGCGCCGC ATCTATGTTT ACAAGCACCT CGCGAATCTG
CCGCTGCTCG TCGACGTCGC GCCCGCCGAG ATCGACATCT ACGCATCGTG GCGCCATCGC
GCGATCTGGA CCGCCGTGCT GATGGGCCTG TTTACCGCGT TCATCGCGTG GGGCTCGCTC
GCGCTGTCGC GCGAACTCAG GCGCCGGCAG ATCGCCGAGT CGAAGCTGTA CCGGCTCGCG
CACACCGATT CGCTGACCGG CCTCGACAAC CGCGGCACCT TCGACGCGGT GCTCGCGAAG
GAAGCGCAGC GCGCGTCGCG CAGCGGCCGC CCGCTGTCGG TGCTGTTCGT CGACGTCGAT
CATTTCAAGG CGTTCAACGA CTACTACGGC CACCTCGCCG GCGACGACGT GCTGCGCCGC
GTCGCGCAAT CCGCGTCGCG CTGCCTGCGT CGCGACAGCG ACCACGTCGC GCGCTACGGC
GGCGAGGAAT TCGTCGTCAC GCTGCCCGAC ACCGATGCGC GGGGCGCGGC GACCGTCGCC
GAAGCGATTC GCCGCGCGAT CGCCGCGCTG GACATCGCGC ACGGCCGCAG CCCGTACGGG
CACGTGACGA CGAGCATCGG CACCGCGACC GCCACCGGCG GGCGCGTGAA TGCCGCGGCG
CTGCTGCGGC AGGCAGACGA AGCGCTGTAC CGTGCGAAGT CCGGCGGCCG CAATCGCGTG
TCCGACGCCG AGGCGAGCAC GGCCGACGCG TGA
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| Protein sequence | MNSYPLPATL RRHTVSAVAR ILSPRGVLVA GIVLLLLSWG FSTSLLIEAR HDAYGHSVEN
ARNLMLLIER DISRNIELYD LSLQNVVDGL SDPELMALPP RQRHRLLFDR AATGAYLGAI
FVMDPHGNIV IDSATSPPRQ GNFADRDYFT VHRDRLAPGL YISRPYASRL RGGALTIALS
RRIVKADGTF GGIVVGTLNI DYFRALLDGL AVGKHGSAAV IEDNGALVSR LPYDARVVGL
DLHDSPLFIE SQRRSEGALT GVGAIDGVRR IYVYKHLANL PLLVDVAPAE IDIYASWRHR
AIWTAVLMGL FTAFIAWGSL ALSRELRRRQ IAESKLYRLA HTDSLTGLDN RGTFDAVLAK
EAQRASRSGR PLSVLFVDVD HFKAFNDYYG HLAGDDVLRR VAQSASRCLR RDSDHVARYG
GEEFVVTLPD TDARGAATVA EAIRRAIAAL DIAHGRSPYG HVTTSIGTAT ATGGRVNAAA
LLRQADEALY RAKSGGRNRV SDAEASTADA
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