Gene BamMC406_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3577 
Symbol 
ID6181332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp514661 
End bp515272 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content70% 
IMG OID641683346 
Productnicotinamide mononucleotide transporter PnuC 
Protein accessionYP_001810260 
Protein GI172062609 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3201] Nicotinamide mononucleotide transporter 
TIGRFAM ID[TIGR01528] nicotinamide mononucleotide transporter PnuC 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.162448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0889798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCAC TCGAAATCGC CGGCGTGATC GTCAGCGCGC TCGCGATCTG GCTGACCGCG 
AAGCGGCGCA TGCTGTGCTG GCCGGTCGGG CTCGCGTCGG TCGCGCTGTA CGGCTGGATC
TTCTTCGATG CGAAGCTGTA TTCCGACATG CTGCTGCAGG GCGCGTTCGC GGTGCTGCAG
GTGTACGGCT GGCGCCGCTG GATCGCGCAG CGTACGCTGG AGGCGAGCGG CGGCGCGGCG
CCGGCAGGCG ACGTCGCACC CGTCGCCGGC GTGCGGCCGC GGCAGATGCT GCCCGACCTG
CTCGCGGCCG TCGTCGGCAG CGCGCTGCTC GGCGGGATGA TGGCGCGCTG GACCGACGCC
GCGCTGCCGT TCGTCGATGC GTCGCTGACC GCGTTCAGCC TCGTCGCGCA ATACTGGACC
GCACGGCGCT ACATCGCGTC GTGGGGGCTG TGGATCGTCG TGAACGTCGT GTACGTCGGG
ATGTTCGTGT TCAAGGAACT GTATCTGACG GCCGGGCTCT ATGCGCTGTT CATCGCGCTC
GCCGTCGTCG GCTGGCGCGA CTGGAGCAGG ACGGCCGACG CGCTGCGCGC GAGTGCGAAC
CCGGCAAGCT GA
 
Protein sequence
MSPLEIAGVI VSALAIWLTA KRRMLCWPVG LASVALYGWI FFDAKLYSDM LLQGAFAVLQ 
VYGWRRWIAQ RTLEASGGAA PAGDVAPVAG VRPRQMLPDL LAAVVGSALL GGMMARWTDA
ALPFVDASLT AFSLVAQYWT ARRYIASWGL WIVVNVVYVG MFVFKELYLT AGLYALFIAL
AVVGWRDWSR TADALRASAN PAS