Gene BamMC406_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3486 
Symbol 
ID6180366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp413002 
End bp413916 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID641683255 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001810169 
Protein GI172062518 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0180999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACC ATCATGAAGT GATCGTGATC GGCGGCAGCT TTGCCGGGCT GTCGGCCGCG 
ATGCAACTGG CGCGCGCGCG ACGCCGCGTG CTCGTGATCG ATGCCGGGCA GCCGCGTAAT
CGTTTCGCGG AGCATGCGCA CGGCTTTTTC GGGCAGGACG GCAAGCCGCC GGCGCGGATC
GTCGCCGACG CCGCCGCGCA ACTCGCCGCC TATCCGACCG TGCAGCGGAT CGCTGGCGAA
ACGCGCACCG CCGAGCGCGA CGCGAGCGGC CGCTTTCACG TGACGCTCGC GGACGGCAGC
CGCGCCAGCG CCGACCGGCT GATCCTCGCG ACCGGCATCC GCGACGTATT GCCCGCGCTG
CCGGGGCTCG CGGAACGCTG GGGCGTCAGC GTGCTGCATT GTCCGTATTG CCATGGGTAC
GAGGTGTCGG ATCGGCAACT CGGCGTGCTG GCCACGCATC CGCTTTCGGT GCATCAGGCG
ATCCTGATTC CGGACTGGGG GCCGACGACG TGGTTCACGC AACGCATAGT CGAACCGAAC
GAAGAGGAAG CCGCGTTGCT GGACGCGCGT GGCGTGCGCA TCGAGCGGTC GCCGGTCGTC
GAGATCCTCG GCGACGCACC GCGTATCGAC GCGTTACGGC TCGCCGACGG GCAGGTCGTG
CCGATCGATG CGCTGTTCAT CGGCGCGCGT ACGGAGATGG CGAGCGATCT CGCGCAACAG
CTCGGCTGTG CATTCGACGA AGGGCCGCTC GGCGTGGCGA TCCGCGTCGA TACGTGGAAG
CAGACGAGCA TTCCCGGCGT GTTCGCGGCG GGCGATGCGT CGAGCCTGAT GACGAATGCG
ACGTTCGCGT CGGCATCGGG CGTCGCCGCC GGCGTGGGCG CGCATCGTTC GTTGATTTTC
GGGCTTGACG CATGA
 
Protein sequence
MQNHHEVIVI GGSFAGLSAA MQLARARRRV LVIDAGQPRN RFAEHAHGFF GQDGKPPARI 
VADAAAQLAA YPTVQRIAGE TRTAERDASG RFHVTLADGS RASADRLILA TGIRDVLPAL
PGLAERWGVS VLHCPYCHGY EVSDRQLGVL ATHPLSVHQA ILIPDWGPTT WFTQRIVEPN
EEEAALLDAR GVRIERSPVV EILGDAPRID ALRLADGQVV PIDALFIGAR TEMASDLAQQ
LGCAFDEGPL GVAIRVDTWK QTSIPGVFAA GDASSLMTNA TFASASGVAA GVGAHRSLIF
GLDA