Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3484 |
Symbol | |
ID | 6179402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 410731 |
End bp | 411861 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641683253 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_001810167 |
Protein GI | 172062516 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.230259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0513878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCC CACCCCTGAA CACCCCCGCC GCATTGATCG ACGTCGATCG CATGCGCAAC AACATCGCGC GCATGCAGGC GCATCTCGAC GCGCTGGGCG TCAAGTTCCG GCCGCACGTG AAGACCACCA AATGCCAGCA GGTCGTCGAC GCGCAGATCG CGGCCGGCGC GCAGGGCATC ACGGTGTCGA CGCTGAAGGA AGCCGAACAG TTCTTCGCGG CCGGCGTGCG CGACATCGTC TATGCAGTCG GGATGATTCC GGCCAAGCTG GGTCAGGCAC TGGCGCTGCG CCGCCAGGGC TGCGACCTGA AGATCGTCGC CGACAGCCTG CAAACCGCGA ACTCGATCGC CGAATTCGGG CGCGAGCACG GCGAGCGCTT CGACGTGTGG ATCGAAGTCG ACGTCGACGG CCACCGTTCG GGGATTCGGC CCGACGACGG TCTGCTGATC GACGTCGGCC GCGCGCTGGT CGACGGCGGC ATGGCGCTCG GCGGCGTGCT TGCTCACGCC GGTTCCAGTT ATGAATACGA CACACACGAC GCGCTGGTCG CGATCGCCGA ACAGGAGCGC GGCCGCACCG TGCACGCCGC CGAGCGCCTC AGGGCGGCCG GCCTGCCCTG CCCGGTGGTG AGCATCGGTT CGACGCCGAC CGCGCTGTCC GCGACGAACC TCGACGGAGT GACGGAAGTC CGTGCAGGCG TCTACGTGCT GTTCGACCTC GTGATGCACA ACATCGGCGT GTGCGCGCTG GCCGACATCG CGCTGTCGGT GCTGACCACC GTCATCGGAC ACCAGGAAGA AAAAGGCTGG GCCATCGTCG ACGCGGGCTG GATGGCGATG AGCCGCGATC GCGGCACCCA GCGGCAGGCG CGGGATTTCG GCTACGGACA GGTGTGTACC GAAGACGGCG ACGTGCTCGG CGAGTACGTG ATGAGTTCGG CCAATCAGGA GCACGGCATC GTGTCGCGCA TCGATACGCC CGACACGCGC GTCGCGCAGC GGTTTCCTAT CGGCACGCGT TTGCGGATCC TGCCCAATCA CGCATGCGCG ACCGGTGCGC AACATCCGGA ATACCACGCG CTGAGCAGCG ACGGCACGGT CGAGACGTGG CCGCGCTTCT ACGGGTGGTG A
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Protein sequence | MGIPPLNTPA ALIDVDRMRN NIARMQAHLD ALGVKFRPHV KTTKCQQVVD AQIAAGAQGI TVSTLKEAEQ FFAAGVRDIV YAVGMIPAKL GQALALRRQG CDLKIVADSL QTANSIAEFG REHGERFDVW IEVDVDGHRS GIRPDDGLLI DVGRALVDGG MALGGVLAHA GSSYEYDTHD ALVAIAEQER GRTVHAAERL RAAGLPCPVV SIGSTPTALS ATNLDGVTEV RAGVYVLFDL VMHNIGVCAL ADIALSVLTT VIGHQEEKGW AIVDAGWMAM SRDRGTQRQA RDFGYGQVCT EDGDVLGEYV MSSANQEHGI VSRIDTPDTR VAQRFPIGTR LRILPNHACA TGAQHPEYHA LSSDGTVETW PRFYGW
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