Gene BamMC406_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3459 
Symbol 
ID6179199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp378649 
End bp379422 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content69% 
IMG OID641683228 
Producthypothetical protein 
Protein accessionYP_001810142 
Protein GI172062491 
COG category[S] Function unknown 
COG ID[COG4336] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTT CCGAATTCCG CCAGTCCGTA CGCAGCGGCG CGTTCCGCCA GCCGACCGCC 
GGCCAGTGCG GCCCGTTCGC GCAAGCGAAT CTCGCGATCC TGCCGAACGC GTACGCGCAC
GATTTCCTGC GCTTCTGCCA GGCGAACCCG AAGGCGTGCC CGCTGCTGGG CGTCGGCGAG
CCGGGCGCGT TCCGGCTGGA CGTGCTCGGC GAGGATCTCG ACATCCGCAC CGACGTGCCG
AGCTACAACG TCTACCGCGA CGGCCGCCTG ACCGAGCGGG TCGAATCGCT CGAGGCGCTG
TGGCGCGACG ATTTCGTCGT ATTCGCGATC GGCTGCTCGT TCTCGTTCGA GGACATGCTC
GCGCGTGAAG GCATCGCGCT GCGCCATATC GAAGAGGGTC GCAACGTGCC GATGTACCGC
ACGTCGATCC CGAACCGCCG GGCGGGGATC TTCGGCGGCC AGCTGGTCGT GTCGATGCGG
CCGCTGCGCG GCGCCGACGC GATCCGCGCG GTGCAGATCA CGAGCCGGTT CCCGGGCGTG
CACGGTGCGC CGGTCCATAT CGGCCATCCG AGGGAACTGG GCATCGCCGA TCTCGGCGCG
CCGGATTTCG GCGACGCGGT GACGGTGCGC GACGGCGAGC TGCCGGTGTT CTGGGCGTGC
GGCGTGACGC CGCAAACCGC GCTGATGGAA GCGAAGCTGC CGCTCGCGAT CGCGCATACG
CCCGGCTACA TGCTGATGAC CGACATCACG AACGCGTCGC TCGCGGTGTT CTGA
 
Protein sequence
MTPSEFRQSV RSGAFRQPTA GQCGPFAQAN LAILPNAYAH DFLRFCQANP KACPLLGVGE 
PGAFRLDVLG EDLDIRTDVP SYNVYRDGRL TERVESLEAL WRDDFVVFAI GCSFSFEDML
AREGIALRHI EEGRNVPMYR TSIPNRRAGI FGGQLVVSMR PLRGADAIRA VQITSRFPGV
HGAPVHIGHP RELGIADLGA PDFGDAVTVR DGELPVFWAC GVTPQTALME AKLPLAIAHT
PGYMLMTDIT NASLAVF