| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3419 |
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| Symbol | |
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| ID | 6179523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 341950 |
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| End bp | 343110 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641683188 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001810102 |
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| Protein GI | 172062451 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0492382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGA GACGGCGGAT CTACTATACG GACACGCAGA AGGCGTTAAT GTGGGAGCGC
TGGCGCAAGG GCGAGTCGCT GCAGCAGATC GCTCAGTTGT TTGATCGGAA CCATTCCTCG
GTACAACGGA TTCTGGCGGA AACGGGCGGC ATACAGCCAA AGCAACGGCA CCGTTCGAGA
TTGGCACTGA CCCTTGCCGA GCGGGAGGAG ATCTCGCGCT CAGTGGTTGC TGGCGATTCG
ATTCGCGCAA TCGCGAATCA ACTCGGACGT GCTCCGTCTA CCATTAGCCG CGAACTCAAG
CGCAACGGAG GTATGCCAGG CTATCGGGCG AACAATGCTG ACGAACTTGC CTGGGAACGA
GCCCGTCGCC CCCAAGTCTG CAAGCTCGTC AGGAACCGGG AACTCGCCCA GGTCGTGGCA
GGCAAGCTCC GGCTGCAATG GTCGCCCGAG CAGATCGCTG GTTGGCTTAA GCACGTGTAC
GCGGTCAACA GGGACTATCA GGTGTCGCAC GACACCATAT ACCGCAGCCT CTACATACAA
GCTCGTGGTG CGCTCAAAAA GGAATTGCTC GAGCATTTGC GGCGCTCGCG GGCCATGCGC
CGTTCGCGTC ATCACACGAT GAAGACCGAC GATCACGGCA GAATCTGCGA TACCGTCCCG
ATTAGCGAAC GCCCCGCGAC CGTTGATGAT CGTGCGATAC CGGGCCACTG GGAAGGCGAT
CTGCTGTTCG GTAGCGCGAA CAGCCAGATC GCCACCCTCG TCGAGCGTCA GAGCCGCTTC
GTGATGCTGG TAAAGGTTGC CAGTAAGGAT ACGGAAGCGG TCATCAATGC ACTGATCCGA
CACGCCGGCA AGCTTCCTCA GGAACTATAC AAATCACTGA CCTTGGACCG AGGCAAAGAG
ATGGCCGATC ACACGCGCTT CACCGTGGCC ACCGACATCA AGGTCTATTT TTGTGATCCG
CAGAGCCCTT GGCAGCGTGG CTCGAACGAG AACACAAATG GGCTCTTGAG GCAGTATTTC
CCGAAGGGGA TCGATCTCTC GGCCTATTCG CAGGTCAAGC TAAACGCTGT AGCCAGGCGG
CTCAATGAGC GTCCGCGAAA GACACTAGAC TTCGATACAC CGGCGGAGAG ATTTCATCAA
TTCGTTGCAT CGACGGGTTG A
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| Protein sequence | MKQRRRIYYT DTQKALMWER WRKGESLQQI AQLFDRNHSS VQRILAETGG IQPKQRHRSR
LALTLAEREE ISRSVVAGDS IRAIANQLGR APSTISRELK RNGGMPGYRA NNADELAWER
ARRPQVCKLV RNRELAQVVA GKLRLQWSPE QIAGWLKHVY AVNRDYQVSH DTIYRSLYIQ
ARGALKKELL EHLRRSRAMR RSRHHTMKTD DHGRICDTVP ISERPATVDD RAIPGHWEGD
LLFGSANSQI ATLVERQSRF VMLVKVASKD TEAVINALIR HAGKLPQELY KSLTLDRGKE
MADHTRFTVA TDIKVYFCDP QSPWQRGSNE NTNGLLRQYF PKGIDLSAYS QVKLNAVARR
LNERPRKTLD FDTPAERFHQ FVASTG
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