Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3402 |
Symbol | |
ID | 6180478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 325377 |
End bp | 326213 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683171 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001810085 |
Protein GI | 172062434 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCT CATCCACCGG CGCACGCAAG CCGTTCGGGC GCCTGCTGCT GACCGGCGCG GCCGGCAACC TCGGCCGCCA GGTGCGCGGC GCGCTGGCGA CCTGGGCCGA CGTCGTGCGC GTGAGCGACA TCGCCGCGCT GGACGACGCG GCCCCGCACG AAGAAGCCCG TGTCGTCGAC CTGGCCGACC GGCCGGCGGT GATGGACCTT GTCGACGGCG TCGACGCGAT CGTCCATCTC GGCGGCATTT CGGTCGACGC GCCGTTCGAC GATCTCGTCG ATGCGAACAT CACCGGCACG TACAACCTGT ACGAAGCCGC GCGCAAGCAC GGCGTGAAGC GGATCGTGTT CGCGAGCTCG AACCATGCGA TCGGTTTCCA TCCGGTCACG GAGGTGCTCG ATGCCGATTC GCCGCTGCGC CCGGACAGTC TCTATGGCGT GACGAAGTGC TTCGGTGAGT CGCTGTCGCG CTACTACTTC GACCGCTTCG GGATCGAGAC GGTGTGCCTG CGGATCGGCT CGTCGTTCGA GGCGCCGAAG AACCCGCGCA TGCTCGTGAC GTTCCTCAGC TATCGCGACT TCATCGAGCT CGTGCGCTGC TCGCTGCTGA CGAACCGCGT CGGGCACGCG ATCGTGTACG GCGTGTCCGA CAACCCGGTG AAGTGGTGGG ACAACACGAA GGCCGGCTTC CTCGGCTTCC GGCCGCAGGA CAGCTCCGAG CAGTTCGAGG GGATGTTCCC GCTCACCGCG CCAACCGCCG ACTACGACGA TCCCGCGCAG CGCTACCAGG GCGGCGGGTT CGTCGTCGGC GAGCCGATGG AGCGCAACGC GAAGTAA
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Protein sequence | MNASSTGARK PFGRLLLTGA AGNLGRQVRG ALATWADVVR VSDIAALDDA APHEEARVVD LADRPAVMDL VDGVDAIVHL GGISVDAPFD DLVDANITGT YNLYEAARKH GVKRIVFASS NHAIGFHPVT EVLDADSPLR PDSLYGVTKC FGESLSRYYF DRFGIETVCL RIGSSFEAPK NPRMLVTFLS YRDFIELVRC SLLTNRVGHA IVYGVSDNPV KWWDNTKAGF LGFRPQDSSE QFEGMFPLTA PTADYDDPAQ RYQGGGFVVG EPMERNAK
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