| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3352 |
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| Symbol | |
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| ID | 6180988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 261286 |
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| End bp | 262824 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683121 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001810035 |
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| Protein GI | 172062384 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGAC TTGCGATGTC ACCGCGAATC GGCGCGACCG CGCTCGTGCT GGCCTTCCTC
GCCGGCTGTA CGACGTTCTC GAAGGACGGC GGCTTCGACG CCGTGTCGGC CACCGCATCG
GAGCGGATCG GGAAAGACGC CGTCATCGTC AGGACCGACG CCGACCGCGA CGCCGTCGAC
ACACGGACGA AGGAACTGCT CGCGAAACCG CTGTCGATGG ACGACGCGGT GCAGCTCGCG
CTGCTGAACA ACCGCGGCTT GCAGGCGTCG TACGCGGCGC TCGGGCTGTC GGAGGCCGAT
CTCGTGCAGG CCGGCCGCCT GCCGAACCCG CGCTTCTCGT TCAGCCGCAC GCGGGCCGGC
GACGGCGAGC TGAGCCTCGG GCGTACATTC TCGGCCAACG TATTCGCGCT GCTGACGCTG
CCGCTCGCGA CGAACATCGA ACGCCGCCGC TTCGAGCAGA CCAAGCTCGA GACGGCCGAC
GCGATGCTGA AGGTGGCAGC CGACGCGCGT CGCGCGTATG TCGAGGCCGT CGCCGCCGAA
CAGGCCGCGA TCTATGCGCG GCAGGTGCGC GACGCCGCGA GCGCCGCCGC CGAACTCGCG
CTGCGCATGC GCCAGGCCGG CAACTTCAGC CGCCTCGACT ACGCACGCGA ACAGGCGTTC
CATGCGGACG CGGTCGCCCA GCAGGCGAAG GCGCAGCAGC AGGCCGTGGC CGCGCGCGAG
AAGCTCACGC GGGCGATGGG GCTGTGGGGC GAGCGCATGC ACTACGCGCT GCCCGAGCGT
CTGCCCGACC TGCCGAAGGC GCGCCCGGAC CTGCCCGATC TCGAACGCTA CGCGATGAGC
AACCGTCTCG ACATCCAGGC CGCGAAGCTG CAGACGCAGG GCGTCGCGTC GTCGCTCGGA
CTGAGCAAGG CGACGCGCTT CGTCAACGCG GTCGATCTCG GCTACGTGAA CAACTACGAG
ACCGACAAGG GGCACGAGCA CGGCTACGAG ATCAGCGTCG AGATTCCGCT GTTCGACTGG
GGCGGCGCGA AGGTCGCGCG GGCCGAGGCC GTCTACATGC AGTCGGCGAA CCGGCTCGCG
CAGACCGCGA TCGACGCACG CTCGGAAGTA CGCCAATCGT ACGCGGCGTA CACGACGAGC
TACGACGTTG CGACGCACTA TCGCGACGAA GTCGTGCCGC TGCGCAAGAC GATCTCGGAC
GAGTTGCTGC TGCGCTACAA CGGGATGCTC GCGAGCGTGT TCGAGCTGCT CACCGATGCG
CGTGAACAGG TCGGCGCGGT CAACGGCTAC ATCGATGCGC TGAAGGACTA CTGGCTCGCC
GAAACCGATC TGCAGATGGC CGTCGGCGGC CGGCTGCCTA CTTCGCAGTC GATCTCGCAG
CCGACTTCGG AGCCTACTTC GCAGTCGACC TCGCAGCCAA CCCCGCAGCC TGCGCCGCGC
ACCTCCGCGC CCGCCGCCTC CACGCCCGAC GCTGCACCGC AGCCGGCTTC CTCTCCCGTG
GCGCAACCGG CGCCCGCAAC GCATCCGGAA GGTCATTGA
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| Protein sequence | MTRLAMSPRI GATALVLAFL AGCTTFSKDG GFDAVSATAS ERIGKDAVIV RTDADRDAVD
TRTKELLAKP LSMDDAVQLA LLNNRGLQAS YAALGLSEAD LVQAGRLPNP RFSFSRTRAG
DGELSLGRTF SANVFALLTL PLATNIERRR FEQTKLETAD AMLKVAADAR RAYVEAVAAE
QAAIYARQVR DAASAAAELA LRMRQAGNFS RLDYAREQAF HADAVAQQAK AQQQAVAARE
KLTRAMGLWG ERMHYALPER LPDLPKARPD LPDLERYAMS NRLDIQAAKL QTQGVASSLG
LSKATRFVNA VDLGYVNNYE TDKGHEHGYE ISVEIPLFDW GGAKVARAEA VYMQSANRLA
QTAIDARSEV RQSYAAYTTS YDVATHYRDE VVPLRKTISD ELLLRYNGML ASVFELLTDA
REQVGAVNGY IDALKDYWLA ETDLQMAVGG RLPTSQSISQ PTSEPTSQST SQPTPQPAPR
TSAPAASTPD AAPQPASSPV AQPAPATHPE GH
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