| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3349 |
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| Symbol | |
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| ID | 6181443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 259563 |
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| End bp | 260234 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641683118 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_001810032 |
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| Protein GI | 172062381 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATAC TGATAGTCGA AGACGAACCC AAGATGGCCT CCTACCTGCG CAAGGGGCTG
GCGGAGGCGA GCTATACGGT CGACGTGGCC GAGAACGGCA AGGACGGGCT GTTCCTCGCG
CTGCACGAGG ATTTCGATCT CGTCGTGCTC GACGTGATGC TGCCGGAGCT GGACGGCTTC
GAGGTGCTCC GGCGGCTGCG CGCGCAGAAG CAGACGCCGG TCCTGCTGCT GACGGCGCGC
GACGCGATCG AGGACAAGGT CACGGGGCTC GAACTGGGCG CCGACGACTA CCTGCTCAAG
CCGTTCGCGT ATGCGGAGTT CCTCGCACGC ATCCGTTCAC TGCTGCGCCG CGCGCCGCGC
AATGCGCGCG ACTTCCTGCA GGTCGCCGAT CTCGAGGTCG ACCTGATCAA GCGCCGGGTA
CGGCGCGCGG ACAACCGCAT CGACCTGACC GCGCAGGAAT TCGCGCTGCT GCAGCTGCTC
GCGGAACGCG AAGGCGAGGT GCTGACGCGC ACCTTCATCA CGTCGCAGAT CTGGGACATG
AATTTCGACA GCGACACGAA CGTCGTCGAT GCGGCGATCA AGCGCCTGCG CGCGAAGATC
GACAACGCCT ACGAGAAGAA GCTGATCCAC ACGATCCGCG GCATGGGCTA CGTGCTCGAG
GATCGCTCGT GA
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| Protein sequence | MRILIVEDEP KMASYLRKGL AEASYTVDVA ENGKDGLFLA LHEDFDLVVL DVMLPELDGF
EVLRRLRAQK QTPVLLLTAR DAIEDKVTGL ELGADDYLLK PFAYAEFLAR IRSLLRRAPR
NARDFLQVAD LEVDLIKRRV RRADNRIDLT AQEFALLQLL AEREGEVLTR TFITSQIWDM
NFDSDTNVVD AAIKRLRAKI DNAYEKKLIH TIRGMGYVLE DRS
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