| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3344 |
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| Symbol | |
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| ID | 6180729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 251544 |
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| End bp | 253064 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683113 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001810027 |
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| Protein GI | 172062376 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGC AAATGCTCGT CCGCGCCGTC CTGCTGGCGT GCGCCGCCGT GGCGCTGCTC
GGCGCGGGTT ACGTCGCGGG CGCACGCCGT GCGGCAAGCG CGGGGCCGGA GGCCGCCGCT
GCGTCGCCGG CCAGATCCGA CCCGACATCC GGACGCAAGG TGCTGTACTG GCACGATCCA
ATGGTGCCGA ACCAGCACTT CGACAAGCCG GGGAAGTCGC CGTTCATGGA CATGCAGTTG
CAACCCGTCT ATGCGGACGA AGGTGGCGGC ACGTCGGGTG TTCGGATAGA TCCGGGCCTG
CAGCAGAACC TCGGCATCCG CTATGTGGCC GTCAGGCGTC AGGAAGCGGC CGGCGGATTC
GATGCGGTCG GCACCACCCA GTTCGATGAG GCGCGCACGG ACGTCGTGCA GTCGCGCGTG
ACGGGCTACA TCGATCGCCT GTACGCGCGG GCGCCGATGC AGCGCATCGA CAAGGGCGCG
CCGATCGCGT CGCTGTACGT GCCGGACTGG CTCGCACCGC AGGAGGAATA CCTGGCGCTG
AAGCGCGGCG GGATGGATCG CGGCCTGCTG GACGCATCGC GCGCACGCAT GCGCGCGCTG
TCGATTCCGG ACGGCATGAT CGCGAGTCTC GATCGCACGG GCCGCGTGCA GACCCACGTC
GTACTGGCCG CGCCGGAAAC CGGCGTCGTC AGCGAGCTGA ACGTGCGCGA CGGCGCAATG
GTCGCGCCGG GGCAGACGCT CGCGAGGATT TCCGGCCTGT CGACGCTGTG GCTGCTCGTC
GAGATTCCCG AAGCGCTGGC GTTGAACGTG CAGCCGGGGA TGCAGGTCGA CGCGACGTTC
GCGGGCGATC CGTCGCGGCA CTTCGCGGGT CGCATCCGCG AGATCCTGCC GGGCATCAGC
GCGAGCAGCC GAACGCTGCA GGCGCGGCTC GAGATCGACA ACGCATCGCT GAAGCTGACG
CCCGGCATGC TGATGCGCGT GCGCGTCGCC GACCCGAAGG CGACGCCACG CCTGCTCGTG
CCGTCGGAGG CGGTGATCGC CACCGGTAAG CGCACGGTCG TGATCGTGAA GCGCGGCGAC
GGCGGCCTGC AGCCGGCGAC GGTGACGCTC GGCAACGACG TCGGCAGCGA TACGGAAGTG
CTCACCGGGT TGAGCGAGGG CGATACGGTC GTCGCATCAG GGCAGTTCCT GATCGATTCC
GAAGCGAGCC TCAAGTCCGT GCTGCCTCGA CTGGAAAGCA GCGCCGGCGC GAGCGGGGCG
GTGCCTGCGT CGGCGCCGAA GGCGGCGTCG ACGACTTATG AGACCACCGG CAAGGTCGAA
AGCGTCACGG CCGACGACAT CACGTTCTCG CATCGGCCCG TGCCCGCGCT CGGCTGGGGC
GCGATGACGA TGACCTTCGG CAAGCCGTCC GCGACCGCGT TCCCGGACGT GAAGCCGGGC
CAGACGGTGC GCTTCGCGTT CGTGCAGAGC GACGACGGCT ACCGGCTGAC GAAGGTCGAT
CCGCTGGGGG GCAAGCCATG A
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| Protein sequence | MTKQMLVRAV LLACAAVALL GAGYVAGARR AASAGPEAAA ASPARSDPTS GRKVLYWHDP
MVPNQHFDKP GKSPFMDMQL QPVYADEGGG TSGVRIDPGL QQNLGIRYVA VRRQEAAGGF
DAVGTTQFDE ARTDVVQSRV TGYIDRLYAR APMQRIDKGA PIASLYVPDW LAPQEEYLAL
KRGGMDRGLL DASRARMRAL SIPDGMIASL DRTGRVQTHV VLAAPETGVV SELNVRDGAM
VAPGQTLARI SGLSTLWLLV EIPEALALNV QPGMQVDATF AGDPSRHFAG RIREILPGIS
ASSRTLQARL EIDNASLKLT PGMLMRVRVA DPKATPRLLV PSEAVIATGK RTVVIVKRGD
GGLQPATVTL GNDVGSDTEV LTGLSEGDTV VASGQFLIDS EASLKSVLPR LESSAGASGA
VPASAPKAAS TTYETTGKVE SVTADDITFS HRPVPALGWG AMTMTFGKPS ATAFPDVKPG
QTVRFAFVQS DDGYRLTKVD PLGGKP
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