Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3309 |
Symbol | |
ID | 6179855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 220209 |
End bp | 220709 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641683081 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001809995 |
Protein GI | 172062344 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0359106 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAA CTGGAAGACC GGCGACGCCT GCCGATGCCG TGCCCGCGCT CGACCGCATC GATCGCGCGA TCCTCAGGCA GCTTCAGCAG GACGCGTCGA TCTCGAACGT GAGCCTCGCC GCGAAGGTGA AGCTGAGCGC GCCGGCGTGC CTGCGGCGCG TCGAGCGGCT CAAGGAAATG GGGCTGATTC GCGGGATCGT CGCGCTGCTC GATCCGAAGC CGCTCGGGGC CGGCATGCTC GTCGTGATCG GCTTCGTGCT CGACCGCTCG ACGCCGGAAG CGTTCGCCGC GTTCGAGAAG GCCGCGCAGA AGGTGTCGGG ATGCGTGGAG TGCCACGTCG TGACCGGCGA GTTCGATTAC TTCATGCTCG TGCGCACACG CGACAACGAG AGCTTCAATC GGCTGCATGC GGAACAACTG ATCTACCTGC CCGGCGTGCG GCAGGTGCGC TCGTTCATGG TGCTCAAGGA GATTCTGTCG ACGCATGCGC TGCCGGTGTA G
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Protein sequence | MKLTGRPATP ADAVPALDRI DRAILRQLQQ DASISNVSLA AKVKLSAPAC LRRVERLKEM GLIRGIVALL DPKPLGAGML VVIGFVLDRS TPEAFAAFEK AAQKVSGCVE CHVVTGEFDY FMLVRTRDNE SFNRLHAEQL IYLPGVRQVR SFMVLKEILS THALPV
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