| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3284 |
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| Symbol | |
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| ID | 6179231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 187941 |
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| End bp | 191354 |
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| Gene Length | 3414 bp |
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| Protein Length | 1137 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683058 |
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| Product | filamentous haemagglutinin outer membrane protein |
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| Protein accession | YP_001809972 |
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| Protein GI | 172062321 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.934286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGG CCTATTCATT GGTGTGGAAT GAAGCACAGG GTGGCTGGTG CGCAGTCGGG
GAAACGGCGC GCCGGCGCGG CAAGAAGAGC GGCGGCAAGC GCCTGCTTGC GGCGGGTGTG
TCGCTGTTGG GGCTGGCGGC CGCGTCGGGC GCGTATGCGT TGCCGACGGG TGGCGAGATT
GCGTCGGGTA AGGCGGACAT CGCGACGTCG ACGGATGGCA AGACGATGTC GATCAACCAG
CACACGGACA AGCTGATCAC GAACTGGCAG GACTTCAGCG TGGGTGGCGG CGAGCGGGTG
TCGTTCCAGC AGCCGACGAA CCAGTCGATC GCGCTGAACC GGGTGATCGG GGCGAACGGC
AGCCAGATTC AAGGTCAACT GGACGCGAAC GGGCGCGTGT TCCTGGTGAA CCCGAACGGC
GTGATGTTCG GCGCGGGCGC GCAGGTGAAC GTGGGCGGCC TGGTGGCGTC GACGCAAAAC
CTGTCGGACG CTGATTTCCT GGCCGGTCGC TACCGGTTCG CGGGCACATC GGGCCAGTCG
GTGGAGAACG CCGGGACGAT CACGGCGGCG GACGGTGGGA GCGTGGCGCT GCTGGGTGCG
CGGGTGTCGA ACACGGGCGT GATTCGCGCG CAGATGGGCC GCGTGGCGTT GGGCGCGGGC
AATGCATTCA ACGTGAACTT CGACGGCAAC GGGCTGCTGA ACCTTCAGGT CGAAGGTGGG
GCGGTGGACG CGCAGGCGCA CAACGGCGGG CTGCTGAAGG CGGACGGCGG GGAAGTGCTG
ATGACGGCGC GCGCGGCAGG CGATCTGCTG GGCTCGGTGG TCAGGAACAG CGGCACGATC
GAGGCGAAGG GGCTGAGCAG CCGCGCGGGG AAGATCACGC TGGACGGCGG CGAGGTTCAG
GTCGGCGGGA AGCTGGACGC GAGCGCGCAG GACGCAGCGA CGGCAGGCGG CACGGTGACG
ACGCGCGGCG AGCGGGTGGC GGTGTCGCGT GACGCGCAGG TGGATACGCG CGCGGCGTCG
GGCCAAACGG GCCAGTGGGC GATCGAAGCG GCCAACGCCG GGGTCGGCGG TAACGCCGCG
ATCGACGGCG AGACGCTGTC GCGCAACCTG GGCACGACGA ACGTGGCGCT GACCAACACG
TCGGGCGACC TGACGGTGGG CGACGCGGTG AACTGGGCAA GCGACAACGC GCTGGCGCTG
ACGTCGAAAA AGGGCAGCGT CAACCTGAAT CAGTCGCTGA CGGCGAGCGG CGCGAACGCG
GGCGTGACGA TGAACGCGGC GCAACAGATT CGCGTCGGCA ACAAGGTGAC GCTGACGGGC
GAAAACGCGA GCCTGGCGTT GAACGCGGGC AGCGGCCATA CGCTGACGAA CGACGATGCG
GTGGTGACGC TGTCGGGTCG CAATGCGTCG TTCTCGGCGA ATGGCGAAGC GTATGACGTG
ATTCACGATC TCGCGGGGCT GCGCGGTGTC GACGGCAACA TGAACGGCCG TTACGTGCTG
GGCAATGCGA TCGACGGCAA GGGTGCGCAA TTCCGCAGCC TCGGCGGCAA CCGTGCGATG
TTCGGCGGTG TGTTCGACGG TCTGGGCAAT ACCATCGGCA ATCTGTCGGT CTCGAATCCC
GGTAGCGCGA CTGTCGGGTT GTTTGCGGTC AACGGCGGCC GTATCTCCAA CCTCGTACTG
GACAAAATCA CGGCGCGCGG CCTGGTCGGG CAAGTCGTCT CGCCGATCAG CGTCGGCGCA
TTGGCCGGCT ACAACGTAGG TGACATCACG AACGTGAAGG CGAAAGACGT CGTGGTGAGC
GGCGAGGGCC GCGCGATCGT CGGTGGTCTC GTCGGCAGCA ACCTGAGCGG ACGGATCGAT
CGCGCATCCG TTTCGGGCCG CGTCGAAGGC GGCAAGGAGG CGATGTATGT CGGCGGCCTG
GCTGGAGAAA ACCGCACGTT CCTTTCGCCG AATCGTGGCG AGGCGACCGT CAGCAACAGC
CACGCCGACG TACAGGTCAG CAGCAGGTCG TCCGGCGTTA CGGGCGGCCT GGTCGGTATC
AACCGGGGCG CCATCACGGC GTCGACGGCC GCGGGCAGCG TCAGCGCCCT GGCCCGCGGC
GCGCGCGCCG GCGGCCTCGT CGGCTACCAT GAAGGCGGGA GCATCAAGGC ATCCTCGTCG
TCCGCGAGCG TGCGGGCTGG CCATGACGCG ACGGCGGGCG GGCTCGTCGG CTACAACGCC
GCGTCGATCG AGGCATCCGA CGCGACCGGC GGCGTGACCG TGGGCGACAA TGCCAAGGCG
GGCGGCCTGG TCGGGGAGAA TGTCGGCAAG ATCGCCGCGT CGACGGCGGG TGGCAATGTC
GTTGCAGGCA AGTCGGCCAT CGTCGGCGGG CTCGCCGGCG TCAACCGTGC GACGATCCTG
GCGTCGACGG CGAACGGCGG CGTTCAGGCC GGTAACGCCG CGGTGGCGGG CGGGCTCGTG
GGATATAACG CGGGCACGGT TCGCGCATCC ACCGCGAACG GCAAGGTCTC GACAGGCGCC
GACAGCGAAC TGGGCGGCCT CGTCGGCCGT AACGGCGTCC TCGGCCAGGT GATCGCGTCG
AGCGCGAACG GCAACGTGGA CGGGCGCGAC AACGTGAAGG CCGGCGGGTT GGTCGGCTTG
AACGACGGTG CGATTGACGG TTCGTCGGCC ACGGGGACGG TCAAGGTCGG CGCGCGGAGC
GTGGCGGGCG GCCTGGTCGG CGTCAACACC GAAAGCGTGA AGTCGTCCGA TGCACACGGT
CCGGTCATTG CCGGCGTATC GAGCACCGTG GGCGGCCTCG TCGGCGAGAA CAGCGGCGAG
GTGGTCGCTT CCTCGGCGGC CGGCAGTGTA TCGACTGCTG CGAACGGCAT CGCAGGCGGG
CTCGTCGGCA AGAACGCGGG CAAGGTGGCG AATGCCAATG CGCGCGGGAG CGTCAACATT
GCCGGTACGG GCAGCGCTGG CGGCCTGGTC GGGCGCAACG AAGGCAGCGT GTCGTCGTCG
AGCGCGACGG GCGACGTCGT CGCGGGCGCC GATAGCTACG TCGGCGGTCT GGTCGGGCAG
AGCGTCATGA GCGCATCGAT CGATGCGTCC GACGCCTCCG GTTCCGCGAA GGGCGGGGAT
TGGAGTAATG TCGGCGGCCT CGTCGGCGAA AACGACGGCA AGGTCGCATC GTCGTCGTCG
TCAGGTACCG TGTCCGGCGG GCGCGGTTCC CGCCTGGGCG GCGTGGCAGG CTCAAACTTC
GGCAACGTCG ATCGTTCGAG CTCGAGCAGC CGTATTGCCT ACACGGCTGG CTATGACCAG
TTGTACGGCG GGCTGGTCGG CCTCAACTTC GGCTGGATGC AAGGCAATAG CGTGAGCGGA
AGCGCGGCGG CGGTGCGGCT CGCGGGCTTC GATTTCGGCG AAATCCGGAA CTGA
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| Protein sequence | MNKAYSLVWN EAQGGWCAVG ETARRRGKKS GGKRLLAAGV SLLGLAAASG AYALPTGGEI
ASGKADIATS TDGKTMSINQ HTDKLITNWQ DFSVGGGERV SFQQPTNQSI ALNRVIGANG
SQIQGQLDAN GRVFLVNPNG VMFGAGAQVN VGGLVASTQN LSDADFLAGR YRFAGTSGQS
VENAGTITAA DGGSVALLGA RVSNTGVIRA QMGRVALGAG NAFNVNFDGN GLLNLQVEGG
AVDAQAHNGG LLKADGGEVL MTARAAGDLL GSVVRNSGTI EAKGLSSRAG KITLDGGEVQ
VGGKLDASAQ DAATAGGTVT TRGERVAVSR DAQVDTRAAS GQTGQWAIEA ANAGVGGNAA
IDGETLSRNL GTTNVALTNT SGDLTVGDAV NWASDNALAL TSKKGSVNLN QSLTASGANA
GVTMNAAQQI RVGNKVTLTG ENASLALNAG SGHTLTNDDA VVTLSGRNAS FSANGEAYDV
IHDLAGLRGV DGNMNGRYVL GNAIDGKGAQ FRSLGGNRAM FGGVFDGLGN TIGNLSVSNP
GSATVGLFAV NGGRISNLVL DKITARGLVG QVVSPISVGA LAGYNVGDIT NVKAKDVVVS
GEGRAIVGGL VGSNLSGRID RASVSGRVEG GKEAMYVGGL AGENRTFLSP NRGEATVSNS
HADVQVSSRS SGVTGGLVGI NRGAITASTA AGSVSALARG ARAGGLVGYH EGGSIKASSS
SASVRAGHDA TAGGLVGYNA ASIEASDATG GVTVGDNAKA GGLVGENVGK IAASTAGGNV
VAGKSAIVGG LAGVNRATIL ASTANGGVQA GNAAVAGGLV GYNAGTVRAS TANGKVSTGA
DSELGGLVGR NGVLGQVIAS SANGNVDGRD NVKAGGLVGL NDGAIDGSSA TGTVKVGARS
VAGGLVGVNT ESVKSSDAHG PVIAGVSSTV GGLVGENSGE VVASSAAGSV STAANGIAGG
LVGKNAGKVA NANARGSVNI AGTGSAGGLV GRNEGSVSSS SATGDVVAGA DSYVGGLVGQ
SVMSASIDAS DASGSAKGGD WSNVGGLVGE NDGKVASSSS SGTVSGGRGS RLGGVAGSNF
GNVDRSSSSS RIAYTAGYDQ LYGGLVGLNF GWMQGNSVSG SAAAVRLAGF DFGEIRN
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