| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3218 |
|---|
| Symbol | |
|---|
| ID | 6179967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 121261 |
|---|
| End bp | 122292 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641682993 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_001809907 |
|---|
| Protein GI | 172062256 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.466338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACC CTTCCCAGCC CCTCGACGTA GCCCGCCTCA CGCGCTATCT GGAAGCGCAC
GTGCCGGGTT TCGAAGGCCC GCTCGACATG GAGAAGTTTG CCGGCGGCCA GTCGAACCCG
ACCTTCCTGC TGCACGCGAA GAGCGGCCGC TACGTGCTGC GCCGCCAGCC GCCCGGCGAA
CTGCTGAAAT CCGCGCACGC GGTCGATCGC GAATTCCGCG TGCTCACCGC GCTGTCGGGC
ACCGCGGTGC CGGTGGCACA TCCGTATCAC CTCTGTGAAG ACCGCGACGT GATCGGCAGC
CTGTTCTACG TGATGAGCTT CGAGGACGGC CGGATCTTCT GGGATCCGGC GCTGCCGGAA
CTGCCGAAGG CCGATCGGGC GATCTGCTAC GACGCACTGC TGCGCACGAT GGCCGCGCTG
CACGACGTGG ATGTCGACGC GGTGGGCCTC GCCGACTACG GCCGCCCCGG CAACTACTTC
GAGCGCCAGG TCGGCGTATG GACGAAGCAG TATCGCTCGG CGGAAACGGA GCGCCTCGAC
GCGATGGAGA CGCTGATCGA CTGGCTGCCG AAGGCATGCC CGGAAGACAC GGGCCGGCCC
GCGCTGGTGC ACGGCGATTT CCGGATCGAC AACCTGATGT TCGCGCGCGA CGACTATCGC
GTGCAGGCCG TGCTCGACTG GGAGCTGTCG ACGCTCGGCA ATCCGCTCGC CGATCTCGCG
TACTTCTGCA TGTGCCTGCG GCTGCCGTCG GGCGGCCAGG TGCGCGGGCT CGCGGGCCAG
GATCGTGCCG AACTCGGCAT TCCCGATGAA GCGGCGATCG TCGCGCGCTA TTGCGAACTG
CGCGGCCTCG CGCCGATCCG CGACTGGCAC TTCTATCTGG CCTTCAGTTT CTTCCGGCTC
GCGGCGATCG CGCAGGGCGT GAAGGCGCGC GCGCTGCAGG GCAACGCGTC GAGCGAGCAG
GCGCTGCGCG TGGGCGCGAT GGCCGGCCGG CTGGCCGAGA TGGCCGTCGG CGTGATCGAC
GCGCATCGCT GA
|
|---|
| Protein sequence | MTNPSQPLDV ARLTRYLEAH VPGFEGPLDM EKFAGGQSNP TFLLHAKSGR YVLRRQPPGE
LLKSAHAVDR EFRVLTALSG TAVPVAHPYH LCEDRDVIGS LFYVMSFEDG RIFWDPALPE
LPKADRAICY DALLRTMAAL HDVDVDAVGL ADYGRPGNYF ERQVGVWTKQ YRSAETERLD
AMETLIDWLP KACPEDTGRP ALVHGDFRID NLMFARDDYR VQAVLDWELS TLGNPLADLA
YFCMCLRLPS GGQVRGLAGQ DRAELGIPDE AAIVARYCEL RGLAPIRDWH FYLAFSFFRL
AAIAQGVKAR ALQGNASSEQ ALRVGAMAGR LAEMAVGVID AHR
|
|---|
| |