Gene BamMC406_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3178 
Symbol 
ID6179256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp80138 
End bp81193 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content44% 
IMG OID641682953 
Producthypothetical protein 
Protein accessionYP_001809867 
Protein GI172062216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAC CGGAACTGGT AAGCGATCTT GAAACAAACA TACAACATCA GATCAAAAAG 
ATTGGGTACC TATACAGCCA AAGAGAGATA ACCAATCGCC AGTATTTCAA TGAGTTTGCG
AATCCGAAAA AGGAATTCGA CGAAGGAAGT GCAATATTGA ATCAGGCATA TTCCGATGCC
GTACTAAATT CAATGGGATC GCTCATCGAC TATTATTGCA TCTGCTGCGC CCTGAAAATT
GGAATTCCTG TTAAGAAAAT AAAAAAAGTA CAGTATCGTT CCCTTACAAA TAAATTTCTG
ATTGACAATT CGTCGCTTTC GAAGTCAGAC AAAGCAACGG CGACAATCGG CACGCTGCAA
AACATATTTA ATAAAAAATA TCCGGAACTC GCAGTGCTTG GCGGCCATGG ATACTGGATG
GGTTTTCTGG GTGAAGCGAT ATCACACACC CTGAAGGAAT ACGGCGCACT GGATCGTAGC
CAGTTTGAAC CCATCTTCCA TGCATCTGAA GCTCGACTGG AGATCGATCC TAAAATAGAG
AAATATTATC ACTACATGCG TCCTCTGTTT TGCAATATCG CCAACAGGTC GGGCATCAGG
CATAATATTT ACATTGATAT CAATAACTTT CTCAAACACA ACGCCGTTCC CTATCTTTCG
ACGAAGATAG AAATTTTCGA GGAAGAGAGG CGGTTTTTTT CATATTTCGA AATCAAGCAT
ACGCACCGCG ATTTCCTGAA GGATGGGATC CTGAAAGATC TTGTCGAAAC CAGCTTTGAG
AAATTGAAAA CCGATCTGGA GACGAAACAC GTCAGTGGAA AGTACGGCGC TTACCTTTGC
GGCCTGGAGC AAGCGTGGGG GCTTGGGCCG GTCCTTGACA TAGATTTCGT CAATGGCTAT
ATCAGCCCAG ATAAGAAGAC CCTGTATTTT TTTGTGGATA CGGTCCTGAT GGCAAAAACC
GAAAGCGCGA CCTTGATTGA TGCGGACGGT AGCCTGTTGC AGTCACTGCA GGCACTGGCG
CGGGAGATTG ATCGGGGCCT GAACTTCAAA TTCTAA
 
Protein sequence
MNSPELVSDL ETNIQHQIKK IGYLYSQREI TNRQYFNEFA NPKKEFDEGS AILNQAYSDA 
VLNSMGSLID YYCICCALKI GIPVKKIKKV QYRSLTNKFL IDNSSLSKSD KATATIGTLQ
NIFNKKYPEL AVLGGHGYWM GFLGEAISHT LKEYGALDRS QFEPIFHASE ARLEIDPKIE
KYYHYMRPLF CNIANRSGIR HNIYIDINNF LKHNAVPYLS TKIEIFEEER RFFSYFEIKH
THRDFLKDGI LKDLVETSFE KLKTDLETKH VSGKYGAYLC GLEQAWGLGP VLDIDFVNGY
ISPDKKTLYF FVDTVLMAKT ESATLIDADG SLLQSLQALA REIDRGLNFK F