| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3159 |
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| Symbol | |
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| ID | 6180032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 58294 |
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| End bp | 58950 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641682935 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001809849 |
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| Protein GI | 172062198 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGAC TGACCCGCGA TGAAATGGCC AAGCGCGTCG CCCAGGACAT CCCCGAAGGC
GCTTACGTGA ACCTCGGCAT CGGCGTGCCG ACGCTGGTGG CGAACCACCT CGATCCAAGC
AAGGAAATCT TCCTGCACAG CGAGAACGGC CTGCTCGGCA TGGGCCCGGC GCCCGCGCCC
GGCGAGGAAG ACGACGAGCT GATCAACGCC GGCAAGCAGC ACGTGACGCT CCTCACCGGC
GGCGCCTATT TCCACCACTC GGATTCGTTC GCGATGATGC GCGGCGGCCA TCTCGACTAC
TGCGTGCTCG GCGCGTTCCA GGTATCGGCG AACGGCGATC TCGCGAACTG GCATACCGGC
GCGCCCGATG CGATTCCGGC CGTCGGCGGC GCGATGGACC TCGCGATCGG CGCGAAGCAG
GTGTTCGTGA TGATGGAACA TCTGACGAAA CAGGGCGAGA GCAAGATCGT CGCGCAATGC
TCGTATCCGG TCACTGGCGT GCAATGCGTG AGCCGCATCT ATACCGATCT CGCGGTGCTC
GACGTGACGG CCGACGGCCT GGCGGTGAGC GAGATCTTCA CCGACCTGTC GTTCGACGAA
CTGCAGAAGC TGACCGGCGT GCCGCTGATC GACGCGACGC GCAAGGCCGC GGCCTGA
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| Protein sequence | MKRLTRDEMA KRVAQDIPEG AYVNLGIGVP TLVANHLDPS KEIFLHSENG LLGMGPAPAP
GEEDDELINA GKQHVTLLTG GAYFHHSDSF AMMRGGHLDY CVLGAFQVSA NGDLANWHTG
APDAIPAVGG AMDLAIGAKQ VFVMMEHLTK QGESKIVAQC SYPVTGVQCV SRIYTDLAVL
DVTADGLAVS EIFTDLSFDE LQKLTGVPLI DATRKAAA
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