Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3137 |
Symbol | |
ID | 6181484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 35725 |
End bp | 36675 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641682913 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001809827 |
Protein GI | 172062176 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.806446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACACG AACTCGTCGT CGACGCCAGC AACAGCAGCA CGAATCTGCG CGACCTGATC GCGGACAGCT TCCTGCCGCT GGTCTTTCAC GACACCGGCC CGCAGTTCCG GATGTCCGTG CGGGTCGCGA CGGTGGGCGG CCTGCGGATG GCTGAGGTCG ACACCACCGC GATCCGCGTC GATCGCGACC GCTCGCTCGC GTCGCGCGCC GACAGCGATT GCTACAAGAT CCTGTTCCAG ATCGCCGGAC AAAGCCGCGT CACGCAGCGC AACGCGACGT CGATCGTCAA TCCCGGCGAG TGGGTGATCT ACGATGCGAC GCAGCCGTAC ATGATCGAAT CGGCGAACGC GTCGCGCTTC GTCGCCGCGC TGACGCCGCC GCGAAGCGGC ACGATGTGGC GCTGGTTCGT CGAGCGTGCG GGCGTGCAGG TGCGCCGAAC CGTCGGCAAT GCGCAACTGG CCCTTCAATC GATCCATTAC CTGATGGACG GTCAGGTGCC GAACGATCCG GAAAGCCTGT TCGGCTTCGA GCAGTCGACG CTGATGCTGC TCGATTCGGT GATTCGACGC GAGGCGAGCG ATTCGCTGAC CGGCGCGGAT GCGCGCAGCG CTGCCCTGCG CATGAACGCG GAAATCTACC TGTCGCATCA CTACAGTGAT CCGGATTTGT CGCCGGACAA GCTGGCGAGC GCGCTGAACG TGTCGCGGCG CACGCTGTAT AGCGCGCTGG CCGCATCCGA GCGGACACCG CAGAGCCTGA TTCAGGAATA TCGGCTGCAG GCGAGCCGCC GCGCGCTGGA AGATCCGGCC GATACCAACC GCACGCTGCT GGAACTCGCA ATCGCGTGCG GGTTTTCGGA CATCACGCAT TTCGGGCGGG CGTTCAAGGC ACGGTTCGGG TGTAGTCCGG GGGCGTATCG GGATGCGTAT CGGAGTGCTC CGAGCGAGTG A
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Protein sequence | MAHELVVDAS NSSTNLRDLI ADSFLPLVFH DTGPQFRMSV RVATVGGLRM AEVDTTAIRV DRDRSLASRA DSDCYKILFQ IAGQSRVTQR NATSIVNPGE WVIYDATQPY MIESANASRF VAALTPPRSG TMWRWFVERA GVQVRRTVGN AQLALQSIHY LMDGQVPNDP ESLFGFEQST LMLLDSVIRR EASDSLTGAD ARSAALRMNA EIYLSHHYSD PDLSPDKLAS ALNVSRRTLY SALAASERTP QSLIQEYRLQ ASRRALEDPA DTNRTLLELA IACGFSDITH FGRAFKARFG CSPGAYRDAY RSAPSE
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