Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3135 |
Symbol | |
ID | 6181482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 32520 |
End bp | 34757 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641682911 |
Product | hypothetical protein |
Protein accession | YP_001809825 |
Protein GI | 172062174 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.535305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATG ACCTTTCGCG CGTGTTGCGC TTCAAGCCGC ATTTGCTCGT GCTCGATGCG GGGCCCGAAA CCCTGTTCGT CGTCGACGAG TTCAAGCGCA CGATGCTGTC CGGCGCGATC TTCGTGCGGA TCGCCGCGTG CCTGCGGGCG CGCATGACGA CCGCCGAGAT CGTGACGACG CTTGCCGGCA CGTTCGGCGA ATGGGACGTG CTCGCCCGGC TCGACCACCT GGTGCGCCGC GGCTACGTGC GCGCCGATCC GCCGCACGAC GACGACGCGG CGCGCGGCTT CTTCGAGCGC GCCGGACTCG ACGGCGACGC GGCTTGTGCG CGCGTCGTTC AACTGCGCGT CGCGGTCGAG GCGTTCGGCG CCGACGATGC GGCGCTCAGG CGCGCGCTCG ACACGGCCGG CATCGATGTC GTGCCGGACG CCGAACTGAC CGTCGCGATC GCCGATACGC ACGACCGCGA CGATCTCGCC GCGTGCGCCG CGCGCGTCGC AGCGCGCGGC GGCGCATTGC TCGTCGTGGC GGCCGGCGGC GTGCAGACGC TGATCGGGCC GTTGCTGGCC GGCGGCGGCG CGCTGGCCGA TGCGCCGTGC ATCGAATGCG TGCGCTACTG GATTCGCCTC AATCGGCCGG TCGAGGCACT GCTTGCGCGC CATCACGGCA GCGCGGCAAC GCGTCTGCCG CCGGTCGCGT CGCGTGCCGG CGCCGCTGCC GCCGCGGCGC TCGTGACGGC GACGGTCGAG CAGATCGCGG TCAACCGCAC GATAGCGGAG CGTTCGCAAA CGCATCTCGT GGCGCAGCGC ATCGATACGT TGACCGTCGA ACGGCACCGC GTGATGAGGC GTCCGCAATG CCCGTGCTGC GGCAATCCCG CATGGATGCG CGAGCAGGCG GCGCGGGCGC CGCGGCTCGC CGATCATGCG CCGTTGACAC GTGCCGACGG CGGCTACCGG ACCGCCGATC CGCAACAGGT GTTCGAACGT CATGCGCATC TGATCTCGCC GGTGAGTGGC GCGATCGCGT ATCTGCATCC GATGCCGAAG CGGCACGCGG GCCTGCGCAA GGTCTATGCG TCGGGCTTTC TGGTGTGCCC GGCGGCTGTG CCGGGCAGCA ACCGGTTCGA CAGGATCTGT TCGGGCAAGG GCCGCACCGA CGAGCAAGCC CGCGTGAGCG CGCTATGCGA AGCGCTCGAA CGATACAGCA GCGTGTATCA GGGCGACGAG GCGAAGTTCA CCGGCAGCAT GGAAAGCCTG CTCGCCGATC CGGCTTGCGA CGCCGAGCCC GTCCACGTGA ACGAGCTTCA GCAGTTCAGC GAACGGCAAT TCGATGCGCG CGACGCGATC AATGCATTGA CCCGCGATGT CCGCAAGCAG GTGCCGCCGC GCTTCACGTC GCGCGACGTG ATCGACTGGA CGCCTGCATG GTCGCTCGTG AGCGGCGGGC GCCGCCTCGT GCCGCTGAGC TACTGCTATG CGGAAACGCC GGACAGTGCG CAGGCGCCGG CCGCGTGCGT GCACAACCCG AACGGTTGCG CGGCGGGTGC GAGCATCGAC GAGGCAATTC TGCAAGGCAT GCTCGAATTG ATCGAGCGCG ATGCGGTCGC GATCTGGTGG TACAACCGGC TTGCACGCCC CGGCATCGAT CTCGCGAGTT TCGATGATCC GTATTTCGAC GCGCTCGTGC GTGAATACGC GACGCTCGGG TGGCGTTTGT GGGCACTGGA CATCACGACC GATCTCGCGG TGCCGACCGT GGCCGCGCTC GCGGAGAATC CGCAAGACGG GCGCTTCTCG ATCGGCTTCG GCTGCCATCC GGACGGCCGG ATCGCGGTGC AGCGGGCACT GACCGAAGTC AACCAGTTGC TCGATGTCGC CGCGGATGCG CCGCATCCGT GGGACCGCGA CAAGCTCCCG GCCACCGGAT TTCTGTATCC GGCGGCGGGC GCGCGTGCAA CGACGCATTC GACTTGGGAA CCGGTCGATG CCGCGTCGCT ACCGGCGGCG CTCGCGCATT GCATCGGGCG CATCGCGGCG GCCGGCATGG ACGTGCTCGT CGTCGACAAG ACGCGGCCCG ACATCGGCTT GTCCGTGGTG CAGGTCATCG CGCCGGGGCT GTGCCATTTC TGGCCGCGGT TCGGCGCGCG GCGGTTGTAT TCGGTTCCGG TCGAACGGGG TTGGCGTGCG CAGCCGTGCG ATGAAACGGA GCTGAATCCC GCGCTGCTGT TTCTGTGA
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Protein sequence | MLDDLSRVLR FKPHLLVLDA GPETLFVVDE FKRTMLSGAI FVRIAACLRA RMTTAEIVTT LAGTFGEWDV LARLDHLVRR GYVRADPPHD DDAARGFFER AGLDGDAACA RVVQLRVAVE AFGADDAALR RALDTAGIDV VPDAELTVAI ADTHDRDDLA ACAARVAARG GALLVVAAGG VQTLIGPLLA GGGALADAPC IECVRYWIRL NRPVEALLAR HHGSAATRLP PVASRAGAAA AAALVTATVE QIAVNRTIAE RSQTHLVAQR IDTLTVERHR VMRRPQCPCC GNPAWMREQA ARAPRLADHA PLTRADGGYR TADPQQVFER HAHLISPVSG AIAYLHPMPK RHAGLRKVYA SGFLVCPAAV PGSNRFDRIC SGKGRTDEQA RVSALCEALE RYSSVYQGDE AKFTGSMESL LADPACDAEP VHVNELQQFS ERQFDARDAI NALTRDVRKQ VPPRFTSRDV IDWTPAWSLV SGGRRLVPLS YCYAETPDSA QAPAACVHNP NGCAAGASID EAILQGMLEL IERDAVAIWW YNRLARPGID LASFDDPYFD ALVREYATLG WRLWALDITT DLAVPTVAAL AENPQDGRFS IGFGCHPDGR IAVQRALTEV NQLLDVAADA PHPWDRDKLP ATGFLYPAAG ARATTHSTWE PVDAASLPAA LAHCIGRIAA AGMDVLVVDK TRPDIGLSVV QVIAPGLCHF WPRFGARRLY SVPVERGWRA QPCDETELNP ALLFL
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