Gene BamMC406_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3130 
Symbol 
ID6180908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp25102 
End bp25815 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID641682906 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001809820 
Protein GI172062169 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACACA ACCCCTCCCG CGGCCATGCC CGATGCGACG GTCATGGTGC GCATGCCGGC 
CCTGACTGGT TCGCCGGCCT CTGGCACGCG ATCGGCCGCC ATCGCCGCGG CCACGACCCG
TTTGGCGGTG GCGGCCCATT CGGCGGCCGG GGCGGACGCG GCGGCTTTGG CGATTTTGGC
GACGACGGCA TGCCGCGCGG CCGCCAGTTC AGCTCCGACG ATCTCCAACT GTTGCTGCTC
GCCCTCGTGG CCGAGCAGCC GAGCCACGGC TACGAGCTGA TCAAGGCGCT CGACACGCGC
TCGAACGGCT TCTACAGCCC GAGCCCCGGC ATGGTGTATC CGGCGCTCAC GTATCTCGAG
GAAGTCGGCT TCGTCGCGTC GCAGGCGGAA GGCAATCGCA AGCGCTATGC GCTGACCGAT
GCCGGCCGCG CGCACCTCGA CGCGCAGCGC GAACGCGTCG ACACGCTGTT CGCGCGCCTC
ACGCACCTCG CACGCAAGAT GGAATTCATG CGCCGCGCGT TCGCCGGCGA ATCGGCGAGC
AGCGACGCAC CGGACGACGC ACAGCCCGGC TGGCTTCCGG AGTTCGTCGA AGCGCGTCTC
GCGCTCAAGC GGGCGCTGCT GCACAAGAGC GCTGCCGACG CCGACGAACA ACGGCGCATC
GCGGCGATCA TGCGCCGCGC GACGGCCGAA ATCGAAGGCG GCACCGGCGC GTAA
 
Protein sequence
MRHNPSRGHA RCDGHGAHAG PDWFAGLWHA IGRHRRGHDP FGGGGPFGGR GGRGGFGDFG 
DDGMPRGRQF SSDDLQLLLL ALVAEQPSHG YELIKALDTR SNGFYSPSPG MVYPALTYLE
EVGFVASQAE GNRKRYALTD AGRAHLDAQR ERVDTLFARL THLARKMEFM RRAFAGESAS
SDAPDDAQPG WLPEFVEARL ALKRALLHKS AADADEQRRI AAIMRRATAE IEGGTGA