Gene BamMC406_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3064 
Symbolfmt 
ID6178172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3402803 
End bp3403786 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content74% 
IMG OID641682841 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001809756 
Protein GI172062104 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATA CGTTGCGCGT GATTTTTGCC GGCACGCCGG AATTCGCCGC GGCCGCACTC 
GCCGCGATCC ACGAGGCCGG TTTTCCGGTG CCGCTCGTGC TCACCCAGCC CGATCGCCCT
GCCGGGCGCG GGATGAAACT GCAGGCGAGC GCCGTGAAGC GCTATGCCGT CGAGCACGGG
ATACCCGTCG CGCAGCCGCC GTCGCTGCGC CGCGCGGGCA AGTACCCGGG GGAGGCGGCC
GACGCGATCG AGCTGCTGCG CACGACCCCG CACGACGTGA TGGTGGTCGC CGCGTACGGC
CTGCTGCTGC CGCAGGAGGT GCTCGACATT CCGCGCGCCG GCTGCATCAA CATCCATGCG
TCGCTGCTGC CGCGCTGGCG CGGCGCCGCG CCGATCCACC GCGCGATCGA GGCCGGTGAC
GCCGAGACGG GCGTCACGCT GATGCAGATG GACGTCGGCC TCGACACCGG CGCGATGATC
GAGGAAGCGC GCGTCGCGAT CGCGCCCGAC GATACGACCG CAACCCTGCA CGACCGGCTG
GCCGCCGACG GCGCGCGGCT GATCGTCGAC GCGCTGGTGC GGCTCGAGCG CGACGGCGCG
CTGCCTGCCA CCCCGCAGCC GGCCGACGGC GTGACCTATG CGGAAAAGAT CGGCAAGCAC
GAGGCGGCGC TCGACTGGCG CAAGCCGGCC GACGTGCTCG CGCGCCAGGT GCGCGCGTTC
GACCCGTTCC CGGGCGGCGT CGCGACGCTC GACGGCGCGG CCATCAAGCT TTGGGCGGCC
GAGCCCGTGG CGGCGCGCGG CGACGCGGTG CCCGGCACGA TCGTCGACGC GGCGCCCGAA
GGCGTGATCG TCGCGTGCGG CAGCGGCGCG CTGCGCGTCA CGCAACTGCA GAAGCCGGGC
GGCAAGCGGT TGCCCGCGCG CGAATTCCTG GCCGGCTCGC CGCTCGCCGC AGGCCAGCGT
TTCGCGTTGC CCGACGGGGC CTGA
 
Protein sequence
MTHTLRVIFA GTPEFAAAAL AAIHEAGFPV PLVLTQPDRP AGRGMKLQAS AVKRYAVEHG 
IPVAQPPSLR RAGKYPGEAA DAIELLRTTP HDVMVVAAYG LLLPQEVLDI PRAGCINIHA
SLLPRWRGAA PIHRAIEAGD AETGVTLMQM DVGLDTGAMI EEARVAIAPD DTTATLHDRL
AADGARLIVD ALVRLERDGA LPATPQPADG VTYAEKIGKH EAALDWRKPA DVLARQVRAF
DPFPGGVATL DGAAIKLWAA EPVAARGDAV PGTIVDAAPE GVIVACGSGA LRVTQLQKPG
GKRLPAREFL AGSPLAAGQR FALPDGA