Gene BamMC406_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3057 
Symbol 
ID6178253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3394611 
End bp3395345 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID641682833 
ProductexsB protein 
Protein accessionYP_001809749 
Protein GI172062097 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.107003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCGGA CAGACGCTAA AGACGGCGCG CTCGTGCTGT TTTCCGGCGG GCAGGACTCG 
GCCACGTGCG TGGCCTGGGC CCTGGAACGC TATCAGACGG TCGAGACGCT CGGCTTCGAT
TACGGCCAGC GCCACCGCGT CGAACTCGAA TGTCGCGAAG GCGTGCGCGA CGCGCTGAAG
CATCGGTTTC CCGCCTGGGC CGGCCGCCTC GGCGACGATC ACATGATCGA CCTGTCGGTG
CTCGGCGCGA TCAGCGATAC CGCGATGACG CGCACGATCG AGATCGAGAC CACCGCGAAT
GGCTTGCCGA ACACGTTCGT GCCGGGCCGC AACCTGCTGT TCATGACGAT CGCGGCCGCG
ATCGCCTATC GCCGCGGGCT GCGCGTGCTG GTCGGCGGGA TGTGCGAGAC CGATTTCTCG
GGCTACCCGG ACTGCCGCGA CGACACGATG AAGGCGCTGC AGGTCGCGCT GAACCTCGGG
ATGGACACGC GCATCGTGCT CGAGACGCCG CTGATGTGGC TCGACAAGGC GCAGACCTGG
CAGCTCGCCG AACAGCTCGG CGGCGACGCG CTCGTCGAGC TGATCCGCGT CGAGACGCAC
ACGTGCTACG TGGGCGAGCG CGCGGAACTG CACGACTGGG GCTTCGGCTG CGGCGAATGT
CCGGCCTGCA AGCTGCGCAA GCGCGGCTAC GAGGCCTACC TGAAGGGCGA GCGGGTGACC
GAAGCGCCGC TGTGA
 
Protein sequence
MIRTDAKDGA LVLFSGGQDS ATCVAWALER YQTVETLGFD YGQRHRVELE CREGVRDALK 
HRFPAWAGRL GDDHMIDLSV LGAISDTAMT RTIEIETTAN GLPNTFVPGR NLLFMTIAAA
IAYRRGLRVL VGGMCETDFS GYPDCRDDTM KALQVALNLG MDTRIVLETP LMWLDKAQTW
QLAEQLGGDA LVELIRVETH TCYVGERAEL HDWGFGCGEC PACKLRKRGY EAYLKGERVT
EAPL