| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3046 |
|---|
| Symbol | gatA |
|---|
| ID | 6178590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 3382986 |
|---|
| End bp | 3384476 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641682822 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
|---|
| Protein accession | YP_001809738 |
|---|
| Protein GI | 172062086 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCAA AAAGCCTGAC CGAACTGCGC GCCGCGCTCG CCGCCAAGGA ATGCTCGGCC
GTCGAGCTCG CGCAGCTCTA CCTGAAACGG ATCGACGCGG CACGCGACCT GAACGCGTTC
GTCCACGTCG ACGCCGACCT CACCCTTGCG CAGGCGAAGG CCGCCGACGC CGAACTCGCG
CGCGGCGCGG GCGGCGCGCT GACCGGCCTG CCGATCGCGC ACAAGGACGT GTTCGTCACG
CGCGGCTGGC GCTCGACCGC CGGCTCGAAG ATGCTCGCGA ACTACGAGAG CCCGTTCGAC
GCGACCGTCG TCGCCCGCCT GCAGGCGGCC GGCATGGTCA CGCTCGGCAA GACCAACATG
GACGAGTTCG CGATGGGCTC GTCGAACGAG AACTCCGCGT TCGGCGCGGT GAAGAACCCG
TGGGATACCA ACGCGGTGCC GGGCGGCAGC TCGGGCGGCA GCTCGGCCGC CGTCGCCGCG
CGCCTCGCGC CGGCCGCGAC CGGCACCGAC ACCGGCGGCT CGATCCGCCA GCCCGCGTCG
TTCGCGGGCG TGACGGGCAT CAAGCCGACC TACGGCCGCG TGTCGCGCTA CGGGATGATC
GCGTTCGCGT CGTCGCTCGA CCAGGGCGGC CCGATGGCGC AGAGCGCGTC CGACTGCGCG
CTGCTGCTCA ACGCGATGTC CGGCTTCGAC GAGCGCGACT CGACGAGCCT CGAGCGTGAA
GACGAGGATT TCACGCGCCA CCTCGGCCAG CCGTGGGCGG CCGGCAACGA CGCGGGCAAG
CCGCTTGCCG GGCTGCGCAT CGGTCTGCCG AACGAGTATT TCGGCGACGG CCTCGCCGAC
GACGTGCGTG CGTCGATCGA CGCGGCGCTT AAAGCATACG AGGCGCTCGG CGCGACGCTC
GTGCCGGTGT CGCTGCCGAA AACCGAACTG TCGATTCCCG TGTACTACGT GATCGCGCCG
GCAGAGGCGT CGTCGAACCT GTCGCGCTTC GACGGCGTGC GATTCGGCCA CCGCGCCGCG
CAGTACGGCG ATCTGCTCGA CATGTACAAG AAGTCGCGCG CCGAAGGCTT CGGCCCCGAG
GTGAAGCGCC GGATTCTCGT CGGCGCCTAC GTGCTGTCGC ACGGCTACTA CGACGCGTAC
TACCTGCAGG CGCAGAAGAT CCGCCGCATC ATCGCGCAGG ATTTCCAGGA AGCGTTCAAG
TCCTGCGACG TGATCATGGG CCCGGCGTCG CCGACGGTCG CATGGGATCT CGGCGCGAAG
GGCGACGATC CGGTGCAGAT GTATCTCGCG GATATCTACA CGCTGTCGGT GAGCCTCGCC
GGCCTGCCCG GCATGAGCGT GCCGTGCGGC TTCGGCGCGG GCGCGAACGC GAAGCGCCCG
GTCGGTCTGC AGATCATCGG CAACTATTTC AACGAAGCCC GGATGCTGCA GGTCGCCGAC
GCGTTCCAGC GCGCGACCGA CTGGCACAAG CAAGTTCCGG CGGGAGTGTA A
|
|---|
| Protein sequence | MHAKSLTELR AALAAKECSA VELAQLYLKR IDAARDLNAF VHVDADLTLA QAKAADAELA
RGAGGALTGL PIAHKDVFVT RGWRSTAGSK MLANYESPFD ATVVARLQAA GMVTLGKTNM
DEFAMGSSNE NSAFGAVKNP WDTNAVPGGS SGGSSAAVAA RLAPAATGTD TGGSIRQPAS
FAGVTGIKPT YGRVSRYGMI AFASSLDQGG PMAQSASDCA LLLNAMSGFD ERDSTSLERE
DEDFTRHLGQ PWAAGNDAGK PLAGLRIGLP NEYFGDGLAD DVRASIDAAL KAYEALGATL
VPVSLPKTEL SIPVYYVIAP AEASSNLSRF DGVRFGHRAA QYGDLLDMYK KSRAEGFGPE
VKRRILVGAY VLSHGYYDAY YLQAQKIRRI IAQDFQEAFK SCDVIMGPAS PTVAWDLGAK
GDDPVQMYLA DIYTLSVSLA GLPGMSVPCG FGAGANAKRP VGLQIIGNYF NEARMLQVAD
AFQRATDWHK QVPAGV
|
|---|
| |