| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3045 |
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| Symbol | gatB |
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| ID | 6178596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3381509 |
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| End bp | 3382981 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641682821 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001809737 |
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| Protein GI | 172062085 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAT GGGAAGTCGT CATCGGTCTC GAGACGCACG CGCAACTGTC GACCGTCTCG
AAGATTTTCT CCGGCGCACC GACTCAGTTC GGCGCCGAGC CGAACACGCA GGCGTGCCCG
GTCGACCTGG CGCTGCCGGG CGTGCTGCCG GTGCTGAATC GCGGCGCGGT CGAGCGGGCG
ATCCGCTTCG GCCTCGCGAT CGGCTCGACC ATCGCGCCGC GCAGCATCTT CGCGCGCAAG
AATTATTTCT ACCCCGATCT GCCGAAGGGC TATCAGATCA GCCAGTACGA GATTCCGGTC
GTGCAGGGCG GCCAGATCAC GATCCAGGTG CCCGCCAACG AAAAGGCCGG CAAGCCGGCG
TACGAGAAGA CGGTCAACCT GACCCGTGCG CACCTCGAGG AAGATGCGGG CAAGTCGCTG
CATGAAGACT TCGCCGGCAT GACCGGGATC GACCTGAACC GCGCGGGCAC GCCGTTGCTC
GAGATCGTCA CCGAACCGGA AATGCGCAGC GCGGCCGAGG CCGTGGCCTA TGCGAAGTCG
CTGCACGCGC TCGTCGTGTG GCTCGGCATC TGCGACGGCA ACATGCAGGA AGGCTCGTTC
CGCTGCGACG CGAACGTGTC GGTGCGGCCG GTCGGCCAGG AAAAGTTCGG CACGCGCGCG
GAAATCAAGA ACCTGAACTC GTTCCGGTTC CTTGAAGAAG CGATCAACTA CGAAGTGCGT
CGCCAGATCG AGCTGATCGA GGACGGCGGC GAAGTCGTGC AGGAAACGCG CCTCTACGAT
CCGGACAAGC GCGAAACGCG CTCGATGCGC AGCAAGGAAG ACGCGCACGA CTACCGCTAC
TTCCCCGACC CCGACCTGAT GCCGCTCGTG ATCGGCCAGG ACTGGATCGA GCGCGTGCAG
GCCGGGATGC CCGAACTGCC GGCCGCGATG CAGCAGCGCT TCGTCGAGCA ATATGGCGTG
TCCGCGTACG ACGCCGGCGT GCTGACGTCG AGCAAGGCGA TGGCCGCGTA CTTCGAGGCC
GTGGTCGCGA AGGCCGGCGC CGCGAACGCG AAGATCGCCG CGAACTGGCT GATGGGCGAC
GTGTCGTCGC AGCTGAACCG CGACGGCATC GAGATCGACG CGATTCCGGT GTCGGCGGCG
CAGCTCGCGC TGGTGCTGCA GCGCATCGCC GACGGCACGA TCTCGAACAA GATCGCGAAG
GAAATCTTCT CGGCGATCTG GGACGAGAAG GCGACCGACG AAGCCGCGGC CGACCGCATC
ATCGACGCGA AGGGCCTGAA GCAGATCTCC GACACCGGCG CGCTGGAAGC GATCATCGAC
GAGGTGCTCG CCGCGAACGC GAAGTCGGTC GAGGAATTCC GCGCGGGCAA GGAAAAGGCG
TTCAATGCGC TGATCGGCCA GGCGATGAAG GCGACCAAGG GCAAGGCCAA TCCGCAGCAG
GTCAACGAAC TGCTGAAGAA GAAGCTCGGC TGA
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| Protein sequence | MTQWEVVIGL ETHAQLSTVS KIFSGAPTQF GAEPNTQACP VDLALPGVLP VLNRGAVERA
IRFGLAIGST IAPRSIFARK NYFYPDLPKG YQISQYEIPV VQGGQITIQV PANEKAGKPA
YEKTVNLTRA HLEEDAGKSL HEDFAGMTGI DLNRAGTPLL EIVTEPEMRS AAEAVAYAKS
LHALVVWLGI CDGNMQEGSF RCDANVSVRP VGQEKFGTRA EIKNLNSFRF LEEAINYEVR
RQIELIEDGG EVVQETRLYD PDKRETRSMR SKEDAHDYRY FPDPDLMPLV IGQDWIERVQ
AGMPELPAAM QQRFVEQYGV SAYDAGVLTS SKAMAAYFEA VVAKAGAANA KIAANWLMGD
VSSQLNRDGI EIDAIPVSAA QLALVLQRIA DGTISNKIAK EIFSAIWDEK ATDEAAADRI
IDAKGLKQIS DTGALEAIID EVLAANAKSV EEFRAGKEKA FNALIGQAMK ATKGKANPQQ
VNELLKKKLG
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