| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3044 |
|---|
| Symbol | |
|---|
| ID | 6178602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 3380543 |
|---|
| End bp | 3381382 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641682820 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001809736 |
|---|
| Protein GI | 172062084 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAC AACCGTCGCT CGACGATTTC CGCGTGCCGT ACAGCACGCG TGACAAGGAA
GCTGCCGCAT TCAGGCTCGA TGCATTCGAT CCGGCCGCGA AGCCGTTCTC GTCGGGCTCG
AAGGATGCCG ATCGCGAACG GCTCAGCGCC GTGTCGACGG AGCTCGACGT GCAGCAGGAG
CGCCTGCACA CGCAGCAGAA GAAGCGCGTG CTGCTCGTGC TGCAGGGGAT GGACACCAGC
GGCAAGGACG GCACCGTGCG CGCGGTGTTT CGCGACGTCG ATCCGCTCGG CCTGCGCATC
GTGCCGTTCA AGGCGCCGAC GCCGATCGAG GCCGCGCACG ACTTCCTGTG GCGTGTGCAC
GCGCAGGCGC CGGCCGCGGG CGAACTCGCG ATCTTCAACC GCAGCCACTA CGAGGACGTC
CTCGTGCCGC GCGTGCTCCA GCTCATCAGC GACAAGGAAT GCGAGCGCCG CTACCGGCAG
ATCTGCGATT TCGAGACGAT GCTCGCGGAG AACGGCACGA CGATCGTCAA GTGCTTCCTG
CACATCTCGA AGGACGAGCA GCGCGAGCGG CTGCAGGCGC GCATCGACGA TCCGACCAAG
CACTGGAAGT TCGACATCGC CGATCTCGAC GCGCGCAAGC ACTGGGATGC CTACCAGTCG
GCGTACCGCG ACGCACTCGC CGCAACCTCG GCCGAGCATG CGCCGTGGTA CGTGATCCCG
GCGAACTCCA AAACCCATCG CAACGTGATG ATCGCCGAGC TGCTGCTGCG CACGATGACC
GACATGAAGC TCGAATTCCC GCCGCCGAAG CCGGAGCTCG AAGGCGTGAA GATCCGCTAG
|
|---|
| Protein sequence | MAKQPSLDDF RVPYSTRDKE AAAFRLDAFD PAAKPFSSGS KDADRERLSA VSTELDVQQE
RLHTQQKKRV LLVLQGMDTS GKDGTVRAVF RDVDPLGLRI VPFKAPTPIE AAHDFLWRVH
AQAPAAGELA IFNRSHYEDV LVPRVLQLIS DKECERRYRQ ICDFETMLAE NGTTIVKCFL
HISKDEQRER LQARIDDPTK HWKFDIADLD ARKHWDAYQS AYRDALAATS AEHAPWYVIP
ANSKTHRNVM IAELLLRTMT DMKLEFPPPK PELEGVKIR
|
|---|
| |