| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3043 |
|---|
| Symbol | |
|---|
| ID | 6178642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 3379719 |
|---|
| End bp | 3380492 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641682819 |
|---|
| Product | exodeoxyribonuclease III Xth |
|---|
| Protein accession | YP_001809735 |
|---|
| Protein GI | 172062083 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGAG TGATTACCGC CAACCTGAAC GGCATCCGCT CCGCCGCGAA GAAGGGCTTT
TTCGAATGGC TCGGCGAACA GAACGCCGAC TGCGTGTGCG TGCAGGAAAT CAAGGTATCG
GCCGACGACC TGCCGGCCGA CTTCGTCGAG CCGCATGGCC TGAGGAGCTA TTTCCACCAC
GCCGAGAAGA AGGGCTACAG CGGCGCGGGC ATGTACAGCC GCCACGAGCC CGATGACGTG
ATCATCGGCT TCGGCAGCAG CGAATTCGAT CCCGAGGGGC GCTACGTCGA GGCGCGCTAC
GGCAAGCTGT CGGTCGTGTC GGTGTACGTG CCGTCCGGCT CGAGCGGCGA AGAGCGCCAG
CAGGCGAAGT ACCGCTTCAT GGACGAGTTC ATGCCGCATC TCGCCGAGCT GAAGAGCAAG
CGCGAGGTGA TCCTGTGCGG CGACGTGAAC ATCGTCCACA AGGAAATCGA CATCAAGAAC
TGGAAGAGCA ACCAGAAGAA CTCGGGCTGC CTGCCGGAAG AGCGCGCGTG GCTCACGCAG
CTGTTCGACG ATGTCGGCTA TGTCGACGTA TTCCGCACGC TCGACCCGCG CCCCGAGCAG
TACACGTGGT GGAGCAACCG CGGCCAGGCG TACGCGAAGA ACGTCGGGTG GCGGATCGAT
TACCAGATCG CGACGCCGGG CGTGGCCGGC ACCGCGAAGC GCACGTCGAT CTTCAAGGAC
ATCAAGTTCA GCGATCACGC GCCGCTGACG GTCGATTACG ACTACAAGAA GTGA
|
|---|
| Protein sequence | MMRVITANLN GIRSAAKKGF FEWLGEQNAD CVCVQEIKVS ADDLPADFVE PHGLRSYFHH
AEKKGYSGAG MYSRHEPDDV IIGFGSSEFD PEGRYVEARY GKLSVVSVYV PSGSSGEERQ
QAKYRFMDEF MPHLAELKSK REVILCGDVN IVHKEIDIKN WKSNQKNSGC LPEERAWLTQ
LFDDVGYVDV FRTLDPRPEQ YTWWSNRGQA YAKNVGWRID YQIATPGVAG TAKRTSIFKD
IKFSDHAPLT VDYDYKK
|
|---|
| |