| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3023 |
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| Symbol | |
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| ID | 6179016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3353503 |
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| End bp | 3354807 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682799 |
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| Product | hypothetical protein |
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| Protein accession | YP_001809715 |
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| Protein GI | 172062063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCCG GTACGTTCGA CAAAGACGCG TTCGACTTTC TGGCGGGCGA TTCCGGGACG
GTGCTTGATC CGCAGAAGGA GCGCGGCGGC GAGGAAAGAC GCGCATCGGG CCCAGCCGTC
GATCCCGGCG AGTTCGATGC GGTCGTGGAT ATCCAGCAGC GTCTCGACGA GGTGCGGGCG
GCCGCCAATC CGCTGCTCGA GGCGGCGCGA CCGTTGCTCA GAATGCTCGC CGACATGCCG
GCGACGCTCG ATACATCGGA AGCGGTGGAA GGACTGCGCA CGCTCCTCGT ACGCGAGGTC
AGCCTGTTCC AGAAGGTGTG CGACAAGGCC GATCTGCCAT GGAAGCACAT GGCGGTCGTC
CGCTACTGTC TGTGCACCGC GCTGGACGAG GCGGCCAACC GCACGAGCTG GGGCGGAGGC
GGCGTATGGG CAGCGCGAAG TCTGCTGATC ACGTTCGAGG GTGAAGTCGA CGGAGGCGAG
AAATTCTTCC TGCTGATCGG CCGGATGGCG ACCGATCCCC AGGAGTACGT CGACATCCTG
GAAATCCTGT ATCGCGTGCT CGGGCTCGGA TTCGAGGGGC GCTACAGCGT GATGGCCGAC
GGCCGTCGCT ATCTCGAACA GATCCGCCAA CGTCTGTGGA CGCTCATCAC CGGCGCGCGC
GACGCGCTTC AGCCCGAGTT GTCGCCGCAC TGGCGGGGCG CGCCCCCCGG CAAGCTGCCG
CTGCTGCGCA GCGTGCCGGT CTGGGCGTCC GCCGCCGTCG CGGCGCTCGC GCTGTTCGCG
CTGTTCGTGT TTTACCAGTA CCACCTGCTG ACCCAGCGCC ATGTGCTGGA GACGCGCATT
CTCGAGATCG GCAAGGAGCG ACTCGCGTCC GCGCCGCAGC GCCTGCGCCT GTCGCAGCTG
TTGCGGAACG AGATCGCGCG CGGCCTGGTG ACCGTCGACG AGGACGATCG CCGCAGTGTC
GTCGTGTTCA GGGGCGATTC GATGTTCGCG TCGGGCAAGA GAGTGGTGCT GCCGGAGATC
GAGCCCATCC TGAACAAGGT CGCGAGCGAA GTGGCGCGCG TCGGCGGCAA CGTGCTCGTG
AGCGGACATA CCGACAATCA GCCGATTCGT AGCGCGGCTT TCGCGGACAA CCAGGTTTTG
TCGGAAAAGC GTGCGGAGTT CGTCGCACAG ATCCTGCAGC GGGACGGCAC GCCGGCGGAG
CGGATTCGCG CGGTCGGCAA GGGTGACACC CAGCCGGTTG GCGATAACGC GACGGCGGCA
GGCAGAGCAC TCAACCGCCG CGTCGAAATC ATGGTCACCC TGTAG
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| Protein sequence | MNSGTFDKDA FDFLAGDSGT VLDPQKERGG EERRASGPAV DPGEFDAVVD IQQRLDEVRA
AANPLLEAAR PLLRMLADMP ATLDTSEAVE GLRTLLVREV SLFQKVCDKA DLPWKHMAVV
RYCLCTALDE AANRTSWGGG GVWAARSLLI TFEGEVDGGE KFFLLIGRMA TDPQEYVDIL
EILYRVLGLG FEGRYSVMAD GRRYLEQIRQ RLWTLITGAR DALQPELSPH WRGAPPGKLP
LLRSVPVWAS AAVAALALFA LFVFYQYHLL TQRHVLETRI LEIGKERLAS APQRLRLSQL
LRNEIARGLV TVDEDDRRSV VVFRGDSMFA SGKRVVLPEI EPILNKVASE VARVGGNVLV
SGHTDNQPIR SAAFADNQVL SEKRAEFVAQ ILQRDGTPAE RIRAVGKGDT QPVGDNATAA
GRALNRRVEI MVTL
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