| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2966 |
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| Symbol | |
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| ID | 6177417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3287787 |
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| End bp | 3288443 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682742 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001809658 |
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| Protein GI | 172062006 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.288922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGA ACATCCTGCT CGTGGACGAT CACGCAATCG TCCGGCAAGG GGTCCGCCAC
CTGCTGATCG ACCGCGGCGT CGCGCGCGAA GTGACCGAAG CCGAGACCGG TAGCGATGCG
GTGGCCGCCG TCGACCGCCA GACCTTCGAC GTGATCCTGC TCGACATCTC GCTGCCGGAC
ACCAACGGCA TCGAGTTGCT CAAGCGCATC AAGCGCAAGC TGCCGGGCAC GCCGGTGCTG
ATGTTCTCGA TGTACCGCGA GGACCAGTAC GCGGTGCGCG CGCTGAAGGC CGGCGCGTCC
GGCTACCTGT CGAAGACGGT GAATGCCGCG CAGATGATCG GCGCGATCCA GCAGGTCGCG
GCCGGCCGCA AGTACGTGAG CCCGGCGATG GCCGAGGCGC TCGCCGAATA CGTGTCGTTC
GAGAACGAAC CGCTGCCGCA CGAGAAACTG TCCGATCGCG AATACCAGAC GCTCTGCATG
CTGGCGTCGG GCAAGCGCCT CACCGACATC GCGAACACGC TGTCGCTGTC GGTGAAGACG
GTCAGCGTGT ACCGGTCGCG GCTGCTCGAG AAGATGCGGC TGTCGAACAA CGCGGAACTG
ACGTTCTACG TGATGAGCAA CCGGCTCGTC GACATGGCGC CCGCGTCGGG CGGCTGA
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| Protein sequence | MSLNILLVDD HAIVRQGVRH LLIDRGVARE VTEAETGSDA VAAVDRQTFD VILLDISLPD
TNGIELLKRI KRKLPGTPVL MFSMYREDQY AVRALKAGAS GYLSKTVNAA QMIGAIQQVA
AGRKYVSPAM AEALAEYVSF ENEPLPHEKL SDREYQTLCM LASGKRLTDI ANTLSLSVKT
VSVYRSRLLE KMRLSNNAEL TFYVMSNRLV DMAPASGG
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