| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2912 |
|---|
| Symbol | |
|---|
| ID | 6177803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 3233583 |
|---|
| End bp | 3234248 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641682688 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001809604 |
|---|
| Protein GI | 172061952 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4380] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.21812 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGA CACTCTCATT CAAACTGATG TCCGTGCTGT CGATCGTCGC GCTGCTGAGC
GCGTGCGCGC AGCCGGTGAA ACGACCCGAC TACACGGCGT TCAAGAAGAG CCAGCCGCGC
TCGATCCTCG TGTTGCCGCC CATCAACGAG ACGTCCGACG TGACGGCGAC CTACGGGATG
CTGTCGCAGA TGACGCTGCC GCTCGCCGAA TCCGGCTACT ACGTGGTGCC GGTCGCCGTG
ATGGACGAAA CGTTCAAGCA GAACGGCCTG ACCAACGCGG CCGAGATCCA GCAGACATCG
CCCGCGAAGC TGCGCGAGAT CTTCGGTGCC GATGCCGCGC TGTATTCGAA GGTGTCGCAG
TACGGCACCG TCTACCGGAT CCTTGCGAGC GCAACGGTCG TGTCGGCCTC GGCGAAGCTT
GTCGATCTGC GTACCGGCGA CGTGCTGTGG CAGGGCCGCG CGAGCGCGAG CAGCGATGAA
GGGGGCAACA GCGGCGGCGG CGGCCTGATC GGCATGCTCG TGACGGCTGC GGTCAAGCAG
ATCGCGAACA CGCTGATGGA TCAAAGCCAC AGCGTCGCCG CGTACACCAG CACGCGGATG
CTGTCGGCCG GCCCGCCGAA CGGGCTGCTG TACGGTCCGC ATTCGCCGAA GTACGGAACG
GACTGA
|
|---|
| Protein sequence | MFKTLSFKLM SVLSIVALLS ACAQPVKRPD YTAFKKSQPR SILVLPPINE TSDVTATYGM
LSQMTLPLAE SGYYVVPVAV MDETFKQNGL TNAAEIQQTS PAKLREIFGA DAALYSKVSQ
YGTVYRILAS ATVVSASAKL VDLRTGDVLW QGRASASSDE GGNSGGGGLI GMLVTAAVKQ
IANTLMDQSH SVAAYTSTRM LSAGPPNGLL YGPHSPKYGT D
|
|---|
| |