| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2878 |
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| Symbol | |
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| ID | 6177940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3197997 |
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| End bp | 3199073 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682654 |
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| Product | porin |
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| Protein accession | YP_001809570 |
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| Protein GI | 172061918 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.636826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAT TCGCTCGCCG TGCGTCGCGC ACGTCCGTCA AGCTGATCGC CGCGGCCACC
TGCGTGGCGG CCGCCGCACC CGTCCACGCG CAGTCGAGCG TTTCGCTCTA CGGCCAGGTG
GACGAATGGG TCGGCGCAAC CAAGTTCCCG GGCGGCGACC GCGCGTGGAA CGTGTCGGGC
GGCGGGATGT CGACCTCGTA CTGGGGCCTG CACGGTGCGG AGGATCTCGG CAACGGCTAC
AAGGCGATCT TCACGCTGGA GAGCTTCTTC CGCGCGCAGA ACGGCCAGTT CGGGCGCTTC
CAGGGCGATA CGTTCTTCGC GCGCAACGCG TACGTCGGCG TCAGCTCGCC GTACGGCACG
GTGACGGCAG GCCGCCTGAC GACGCACCTG TTCCTGTCGA CGATCCTGTT CAACCCGTTC
TACGACTCGT ACACCTTCTC GCCGATGGTG TACCACGTGT TCCTCGGCCT CGGCACGTTC
CCGACCTATC CGAGCGACCA GGGCGCGGTG GGTGATTCGG GCTGGAACAA TGCGCTGTCG
TACACGTCGC CTTCGTTCGG TGGCCTGAAT TTCGGGGCGA TGTACGCGCT CGGCAACACG
GCCGGCGACA ACCGCTCGAA GAAGTGGAGC GCGCAGTTCA ACTACGCGAA CGGCCCGTTC
GCCGCGACCG CCGTCTACCA ATACGTGAAC TTCAACAACG GCCCGCAGGA CCTGAGCTCG
CTCGTGACCG GCATGAAGAG CCAGGGGATC GGGCTGGTCG GCGCGACCTA CGACCTGAAG
TACGTGAAGC TGTTCGGCCA GTATATGTAT ACGAAGAACG ACCAGGTTGC CGGCAGCTGG
CACGTGAATA CCGCGCAGGG CGGCGTGTCG GTGCCGCTCG GCGTCGGCAA CGCGATGGCG
TCGTATGCGT ACTCGCGCGA CGGCGGCGGC CTCGACCAGA CGCGCCAGAC CTGGGCCGTC
GGCTACGACT ATCCGCTGTC CAAGCGCACC GACGTCTACG CCGCGTACAT GAACGACCAC
ATCAGCGGCC TGTCGAGCGG CAACACGTTC GGCGCAGGCA TCCGCGCAAA GTTCTGA
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| Protein sequence | MKAFARRASR TSVKLIAAAT CVAAAAPVHA QSSVSLYGQV DEWVGATKFP GGDRAWNVSG
GGMSTSYWGL HGAEDLGNGY KAIFTLESFF RAQNGQFGRF QGDTFFARNA YVGVSSPYGT
VTAGRLTTHL FLSTILFNPF YDSYTFSPMV YHVFLGLGTF PTYPSDQGAV GDSGWNNALS
YTSPSFGGLN FGAMYALGNT AGDNRSKKWS AQFNYANGPF AATAVYQYVN FNNGPQDLSS
LVTGMKSQGI GLVGATYDLK YVKLFGQYMY TKNDQVAGSW HVNTAQGGVS VPLGVGNAMA
SYAYSRDGGG LDQTRQTWAV GYDYPLSKRT DVYAAYMNDH ISGLSSGNTF GAGIRAKF
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