Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2799 |
Symbol | |
ID | 6176368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3104442 |
End bp | 3105434 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641682576 |
Product | lipoyl synthase |
Protein accession | YP_001809492 |
Protein GI | 172061840 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0788526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACG TTACCGCTTC CCCCGCACCG GCCGATTCGG CCGCGACCGC AGCCTACGAT CCGACCGCCA AGCAGAAGGC GCAGGCGAAG ACGGCGCGGA TCCCGATCAA GGTCATTCCG ATCGAGAAGC TGAAGAAGCC GGAGTGGATC CGCGTGAAGG CGGCCACCGG CAGTTCGCGC TTCAACGAGA TCAAGACGAT CCTGCGCGAG CACAACCTGC ATACGGTGTG CGAGGAAGCG AGCTGCCCGA ACATCGGCGA ATGCTTCGGC AAGGGCACCG CGACGTTCAT GATCATGGGC GACAAGTGCA CGCGCCGCTG CCCGTTCTGC GACGTCGGCC ACGGCCGCCC CGATCCGCTC GACGCGGACG AGCCGAAGAA TCTCGCGCGC ACGATCGCCG CGCTGAAGCT CAAGTACGTG GTGATCACGA GCGTCGACCG CGACGACCTG CGCGACGGCG GCGCGGGCCA CTTCGTCGAG TGCATCCGCG AAGTGCGCGA GCAGTCGCCG GAAACGCGCA TCGAGATCCT GACGCCGGAC TTCCGTGGCC GTCTCGACCG TGCGATTTCG ATCCTGAACG CGGCGCCGCC CGACGTGATG AACCACAACC TCGAAACGGT GCCGCGCCTG TACAAGGAAG CGCGCCCGGG TTCGGACTAC GCGCACTCGC TGAAGCTCCT GAAGGACTTC AAGGCGCTGC ATCCGGACGT CGCGACGAAG TCGGGGCTGA TGGTCGGCCT CGGCGAAACC GAAGAGGAAA TCCTGCAGGT GATGCGCGAC CTGCGCGCGC ACGACGTCGA CATGCTGACG ATCGGCCAGT ACCTGCAGCC GTCGGAGCAT CACCTGCCGG TGCGTGCGTA CGTGCATCCG GATACGTTCA AGATGTACGA GGAAGAGGCA TACAAGATGG GCTTCACGCA CGCGGCGGTT GGCGCGATGG TGCGTTCGAG CTATCACGCC GATCTGCAGG CGCATGGGGC GGGGGTGGTC TGA
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Protein sequence | MTDVTASPAP ADSAATAAYD PTAKQKAQAK TARIPIKVIP IEKLKKPEWI RVKAATGSSR FNEIKTILRE HNLHTVCEEA SCPNIGECFG KGTATFMIMG DKCTRRCPFC DVGHGRPDPL DADEPKNLAR TIAALKLKYV VITSVDRDDL RDGGAGHFVE CIREVREQSP ETRIEILTPD FRGRLDRAIS ILNAAPPDVM NHNLETVPRL YKEARPGSDY AHSLKLLKDF KALHPDVATK SGLMVGLGET EEEILQVMRD LRAHDVDMLT IGQYLQPSEH HLPVRAYVHP DTFKMYEEEA YKMGFTHAAV GAMVRSSYHA DLQAHGAGVV
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