Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2797 |
Symbol | |
ID | 6176356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3101251 |
End bp | 3102213 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641682574 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001809490 |
Protein GI | 172061838 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0984136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.799433 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGA ACGCGCTGAC GCTGCTCGTC GAGATTCTCG ACGCGGGCAA TCTGAGCAAG GCCGCGCAGC GGCTCAAGGT GAGTCGCGCG AACGTCAGCT ACCGGCTGAA CCAGCTCGAA CGCTCGATCG GCCAGCAGCT CGTGCGCCGC ACGACGCGCC GCATCGAGCC GACCGAGATC GGGCTGAAGC TGTACGAGCA CGGCCGGCGC ATCCGCAACG AACTGCTCGC CGCGCAGGAG TCGGTGACGA CGCTCGGCCA GGACCTGCAG GGTCGCGTGC GACTGTCGGT GCCGAGCGGC TACGGGCAGA TGGTGATGTC CGACTGGCTG CTCGCGTTCA AGCGGCTGCA TCCGGGCATC GTGCTCGACG TGGTGTTCGA GAATCGCGTG GAAGACCTGA TGCGCGACGA GATCGACATC GCGGTGCGCG TGATGCCGGA GCCGCCGCAG AACCTCGTCG CGCGCGACAT GGGGGCGGTG CGCTACGTTG CGTGCGCGTC GGCCGCGTTC GCGGCCGCGC ACGGGATGCC GGCGAGCCTC GGCGCGCTGG CCGCCGCGCC GGTCGTCACC GCGACGGTGA TGGGGAGGCA GTTGCGGATC GCCGCGTATC TTGGCGACGA GCGCCATGAG GTGCTGCTCG AGCCGACGCT GATTTCGGAG AACTTCCTGT TCCTGCGCCA GGCGATCCTC GCCGGGATCG GCGTCGGCAT CGTGCCCGAC TACGTGGTGC AGGACGACAT GCGGCGCGGC ACGGTCGTCA CGTCGCTCGA CGCGTACCGG CTCAGCATCT TCGGCACGCA CATGTACATG CTGTACATGC CGAACCGGCA CCACACGCGT GCGACCGCAA CCTTCATAGA GTTCATCCTC GAACAGGCCG GAAAGACCGG CCGGGGCGGG CCGGGCGCGA TGCGTCAGGG TTTCCTGTCG GATGACAACC CGCCGGCCGC GCGGCGACAA TAG
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Protein sequence | MDLNALTLLV EILDAGNLSK AAQRLKVSRA NVSYRLNQLE RSIGQQLVRR TTRRIEPTEI GLKLYEHGRR IRNELLAAQE SVTTLGQDLQ GRVRLSVPSG YGQMVMSDWL LAFKRLHPGI VLDVVFENRV EDLMRDEIDI AVRVMPEPPQ NLVARDMGAV RYVACASAAF AAAHGMPASL GALAAAPVVT ATVMGRQLRI AAYLGDERHE VLLEPTLISE NFLFLRQAIL AGIGVGIVPD YVVQDDMRRG TVVTSLDAYR LSIFGTHMYM LYMPNRHHTR ATATFIEFIL EQAGKTGRGG PGAMRQGFLS DDNPPAARRQ
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