| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2733 |
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| Symbol | |
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| ID | 6177432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3030780 |
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| End bp | 3031715 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641682510 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001809426 |
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| Protein GI | 172061774 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.328689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCACG CCCTGACCCT TCCGAACACC CTGAGCCCGA CGCCGGCCAA GGCCGAATCG
GCAGGCTCGC TGGCGCTCGC AACTCAATCG ATGTTGCCGG GCCAGCTTGG CAACATCGAC
GCGTATATCC AGGCCGTCAA CCGGATCCCG CTGCTGACCG CCGAGGAAGA ACGCCGCTAT
GCGACCGAAT TCCGCGAAGA CAACAACCTC GACTCGGCCC GCCGCCTCGT GCTGTCGCAC
CTGCGGCTCG TCGTGTCGAT CGCGCGCAAC TATCTCGGCT ACGGCCTGCC GCACGGCGAC
CTGATCCAGG AAGGCAACAT CGGCCTGATG AAGGCGGTGA AGCGTTTCGA CCCGACGCAA
AACGTGCGCC TGGTGTCGTA CGCGATCCAC TGGATCAAGG CCGAGATCCA CGAGTACATC
CTGCGCAACT GGCGGATGGT GAAGGTCGCG ACGACGAAGG CGCAGCGCAA GCTGTTCTTC
AACCTGCGCA GCCACAAGAA GAGCATGCAG GCGATGACGC CCGAGGAAAT CGACGGCCTC
GCGCAGGAGC TCAACGTCAA GCGCGAAGAC GTGACCGAAA TGGAAACGCG CCTGTCGGGC
GGCGACATCG CGCTCGAGGG GCAAGTCGAC GACGGCGAGG AGTCATATGC GCCGATCGCC
TACCTGGCCG ATTCGCACAA CGAGCCGAGC GCCGTGCTCG CCGCGCGTCA GCGCGACATG
CTGCAGACGG ACGGCATCGC GCAGGCGCTC GAGGCGCTCG ACGCACGCAG CCGCCGGATC
ATCGAGGCGC GCTGGCTGAA TGTCGACGAC GACGGCTCGG GCGGCTCGAC GCTGCACGAT
CTCGCCGCCG AATTCGGCGT GTCGGCGGAA CGCATCCGCC AGATCGAAGC GAGCGCCATG
AAGAAGATGC GCACCGCCCT CGCTGAATAC GCATAA
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| Protein sequence | MSHALTLPNT LSPTPAKAES AGSLALATQS MLPGQLGNID AYIQAVNRIP LLTAEEERRY
ATEFREDNNL DSARRLVLSH LRLVVSIARN YLGYGLPHGD LIQEGNIGLM KAVKRFDPTQ
NVRLVSYAIH WIKAEIHEYI LRNWRMVKVA TTKAQRKLFF NLRSHKKSMQ AMTPEEIDGL
AQELNVKRED VTEMETRLSG GDIALEGQVD DGEESYAPIA YLADSHNEPS AVLAARQRDM
LQTDGIAQAL EALDARSRRI IEARWLNVDD DGSGGSTLHD LAAEFGVSAE RIRQIEASAM
KKMRTALAEY A
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