Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2730 |
Symbol | |
ID | 6177107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3027631 |
End bp | 3029277 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641682507 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_001809423 |
Protein GI | 172061771 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCA ACCCGCAAGA CAAGTACCGT CCGTTCGAAC CCGTCCGCCT CAATGGCCGC CGCTGGCCGA CCCGCACCAT CGAGCGTGCG CCGGTCTGGA TGAGCACCGA CCTGCGCGAC GGCAACCAGT CGCTGATCGA GCCGATGAGC ATCGAGCAGA AGCTGGAATT CTTCGACATG CTGGTTGCGA TCGGTTTCAA GGAAATCGAA GTCGGCTTTC CGTCGGCGTC GCAAACCGAC TTCGATTTCG TCCGCAAGCT GATCGACGAC AAGCGCATCC CCGACGACGT GACGATCGAA GTGCTCGTGC AGTCGCGCGA AGACCTGATC GCGCGCACCT TCGACGCGCT CGATGGCGTG CCGCGCGCGA TCGTGCACCT GTACAACGCG ATCTGCCCGT CGTTCCGCCG CATCGTGTTC GGGATGTCGA AGGACGACGT GAAGGCACTC GCGGTCGACG GCACGCGGCT CATCAAGGAA CATGCGGCGG CCCGTCCGGA CACGCACTGG ACCTACCAGT ACTCGCCGGA AACCTTCAGC ATGACCGAAC TGACGTTCGC GCGCGAAGTG TGCGACGCGG TCGCGCAGGC ATGGCGGCCG ACCCGCGATC ACAAGATGAT CGTCAATCTG CCGGCGACCG TCGAAGCCGC GAGCCCGAAC GTGTTCGCCG ACCAGATCGA GTGGATGGAC CGCAATCTCG CGTATCGCGA CAGCATCGTG CTGTCCGTGC ATCCGCACAA CGATCGCGGC ACCGCGGTCG CGGCCGCCGA ACTCGCGCTG CTCGCGGGCG CCGACCGCAT CGAGGGCTGC CTGTTCGGCA ACGGCGAGCG CACCGGCAAC GTCGATCTCG TCACGCTCGC GCTGAACCTC TATACGCAGG GCATCGACCC GGGCCTCGAT TTCTCCGACA TCGACGCGGT GCGCCGCGTG GTCGAGCGCT GCAACCAGAT TCCGGTGCAT CCGCGCCATC CGTACGCGGG CGACCTCGTG TTCACCGCAT TCTCCGGCTC GCACCAGGAC GCGATCCGCA AGGGTTTCGC GCAGCAGCGG CCCGACGCGG TGTGGGAAGT GCCGTACCTG CCGATCGACC CGGCCGACCT CGGCCGCAGC TATGACGCAG TGATCCGCGT GAACAGCCAG TCCGGCAAGG GCGGCGCGAC GTTCCTGCTC GAACGCGGGA TGGGCTTCAC GCCGACGCGC CGCGTGCAGA TCGAATTCAG CCACGCGGTG CAGACGCTCG CCGACGCGTC CGGCGAGGAA GTGACCGGCG ATGCGATCTG CGCGCTGTTC GCCCGCGAAT TCTTCGAGAC CGCCGGCCCG GCCGCGCGCC ACGGTGACGC CGCGCGCTGG CAGAACCGCG ACATCGCGGC TGCGCCGCCG GCCGACGCGA CGCCCGAAGA TGCCGTGCAA TGGATGGCCG CGGCCTTCGC GACGGCAGCC GGCGCGACGA TCGACGTCGC GTCGTGCGAA CACGCGCGCA CGACGGACGG CAGGATCGCG GTATCGGTCG GCTGCCGGAT CGGCGATGCG CCGCTGCGGC ATGGCGTCGG CGTGCACGCC GATGCGGCGA GCGCGGCGCT CGACGCGGTC GTCAGCGCAA TCAACCGCTC GGGCTGGCAT TGCGCCGACC GACGCGCGGC GGCCTGA
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Protein sequence | MKRNPQDKYR PFEPVRLNGR RWPTRTIERA PVWMSTDLRD GNQSLIEPMS IEQKLEFFDM LVAIGFKEIE VGFPSASQTD FDFVRKLIDD KRIPDDVTIE VLVQSREDLI ARTFDALDGV PRAIVHLYNA ICPSFRRIVF GMSKDDVKAL AVDGTRLIKE HAAARPDTHW TYQYSPETFS MTELTFAREV CDAVAQAWRP TRDHKMIVNL PATVEAASPN VFADQIEWMD RNLAYRDSIV LSVHPHNDRG TAVAAAELAL LAGADRIEGC LFGNGERTGN VDLVTLALNL YTQGIDPGLD FSDIDAVRRV VERCNQIPVH PRHPYAGDLV FTAFSGSHQD AIRKGFAQQR PDAVWEVPYL PIDPADLGRS YDAVIRVNSQ SGKGGATFLL ERGMGFTPTR RVQIEFSHAV QTLADASGEE VTGDAICALF AREFFETAGP AARHGDAARW QNRDIAAAPP ADATPEDAVQ WMAAAFATAA GATIDVASCE HARTTDGRIA VSVGCRIGDA PLRHGVGVHA DAASAALDAV VSAINRSGWH CADRRAAA
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