Gene BamMC406_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2620 
Symbol 
ID6176012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2910647 
End bp2911210 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID641682396 
ProductD,D-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_001809313 
Protein GI172061661 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCA GCCCCAACCG CAAGCTCGTC GTCCTCGACC GGGACGGCGT GATCAACGTC 
GATTCGGACG CGTTCATCAA GACGCCCGAC GAATGGATCG CGCTGCCCGG CAGCCTCGAG
GCGATTGCCC GGCTCAACCA CGCAGGTTAT CGCGTGGTCG TCGCGACCAA CCAGTCCGGC
ATCGGCCGCG GGCTGTTCGA CATGGCCGCG CTCAACGAGA TGCACCAGAA GATGCATCGC
GCGGCGGCCG CGGTCGGCGC GCGCATCGAC GCGGTGTTCT TCTGCCCGCA CGTGGCGGAA
GATCGTTGCG AGTGCCGCAA GCCGAAACCC GGCATGATGC AGATGATCGC CGAGCGCTTC
GAGATCGATC CCGGTCACAC GCCGGCCGTC GGCGATTCGC TGCGCGACCT GCAGGCCGCC
GTCGCGGTCG GCTTCCGGCC GCACCTCGTG CTGACCGGCA AGGGCAAGAA GACGCTCGCC
GCGGGCAATC TGCCGGAAGG CACGAAGGTC CACGACGACC TGCGCGCGTT CGCGCTCGAC
TTCCTTTCAC ACGAACACGA GTGA
 
Protein sequence
MPISPNRKLV VLDRDGVINV DSDAFIKTPD EWIALPGSLE AIARLNHAGY RVVVATNQSG 
IGRGLFDMAA LNEMHQKMHR AAAAVGARID AVFFCPHVAE DRCECRKPKP GMMQMIAERF
EIDPGHTPAV GDSLRDLQAA VAVGFRPHLV LTGKGKKTLA AGNLPEGTKV HDDLRAFALD
FLSHEHE