Gene BamMC406_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2593 
Symbol 
ID6176161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand+ 
Start bp2879804 
End bp2880493 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID641682369 
Productcytochrome c, class I 
Protein accessionYP_001809286 
Protein GI172061634 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.412189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTG CTCAAGCGCA GACCAAGCCC ACGGAGCAAG CGCACGCCCA GCAGGCGCCG 
CTCAAGGCAC CCGATACGAT GGCCGAGCGT GTGCGCGGCT GTACCGCATG CCACGGCGTT 
CACGGCCAGG GCACCGACAA CGACTATTTC CCGCGTCTTG CCGGCAAGCC GGCCGAGTAC 
CTGTACAACC AGCTCGTCAA CTTCCGTGAC GGACGGCGCA AGTACCCGCC GATGAACTAC 
CTGCTGACGT ACCTGAACGA CGATTACCTG AAAGAGATCG CCGAGCACTT CTCGGCCGAG 
CGTCCGCCGT ACCCGACGCC CGCCAAGCCG ACGCTGCCGG CCGCCACGCT CGCGCGCGGC 
AAGCAGCTCG TCACGCAAGG CGATCCGTCG CGCAAGCTGC CGGCCTGCGT GGCCTGCCAC 
GGCGCCGGGC TGACCGGCAT GCAGCCGGCG ATCCCGGGCC TCGTCGGCCT GCACGCCGAT 
TACCTGAGCG CACAGCTCGG CGCATGGCGC TCGGGCAACC GCCACGCGAA GGCACCCGAT 
TGCATGCACG ACATCGCGTC GAAGCTGTCG GATGAAGACG TCACGGCCGT GACCGCGTGG 
CTCGCCGCGC AACCGGCGCC CGCCAACCCC GTGCCGGCCC CGGCGCGTTC GATGAAGACT 
CCGCTCGCCT GCGGCAGCGA ACCGCAATAA
 
Protein sequence
MSAAQAQTKP TEQAHAQQAP LKAPDTMAER VRGCTACHGV HGQGTDNDYF PRLAGKPAEY 
LYNQLVNFRD GRRKYPPMNY LLTYLNDDYL KEIAEHFSAE RPPYPTPAKP TLPAATLARG 
KQLVTQGDPS RKLPACVACH GAGLTGMQPA IPGLVGLHAD YLSAQLGAWR SGNRHAKAPD 
CMHDIASKLS DEDVTAVTAW LAAQPAPANP VPAPARSMKT PLACGSEPQ