Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2537 |
Symbol | |
ID | 6178650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2817440 |
End bp | 2818777 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641682312 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001809230 |
Protein GI | 172061578 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.246285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGTCGA TTCGTCATCA ATTGCTGATC TGGCTGCTCG CGATCGTCGT CGCGGGCGTG GGCCTCGCGG GCTGGCTGAT CTACCGGCAG GCGCTCGCCG AAGCGAACGA GCTGTTCGAC TACCAGCTGC AGGAAATCGC CGCGGCGCTG CCGTCGGAGC CGTTCTCGCA GGTGTTCGGC TCGCGCACCA ACGGCGACGA AGGCATCGTG ATCCAGATCT GGAACCGCAA CGGCGTGCTG ATGTACTTCT CGCATCCGCG CGCGCCGATC GCGCCGCGCG CGGAACTCGG CTTCTCGACC GAGCGCACCG ATCGCGGCGA ATGGCGCGTG TACGGCGCGA TCGTCGGCGA CAACGTCGTG CAGCTCGCGC AGCCGCTGTC GGTGCGCAAC CGGCTCGCGG CGAACGTCGC ACTGCGCACG CTGTGGCCGC TGATCGTGCT GCTGCCGTTC CTCGGCGCGG CGGTCTGGAT GATCGTCGGG CGCGGGCTCG CGCCGCTCGC CCGCGTGACG CGCGCGGTCG AGGCGCGCCG GCCGGAAGCG CTCGATCCCT TGCACGATGC GGGCCTGCCG CTCGAGGTGC AGCCGCTCGT GCGCGCGCTG AACGGGCTGC TCGCGCGGCT GTCGGCGGCG CTCGACACGC AGAAGGCCTT CGTCGCCGAT GCCGCGCACG AACTGCGCAC GCCGCTCGCG GCCGTGCAGA TCCAGGCGCA GCTCGTCGCC CGCGCGAAGG ACGATACGTC GCGTCGCGAG GCGATCGCGG ATCTCCAGGA CGGCGTGTCG CGCGCGACGC GTCTCACCGA GCAACTGCTC GCGCTCGCGC GCGCCGAACC GGACGGCGCG ACGATGCGCG AGCCGGTCGA TCTGCAGGCG CTGCTCGTCG AATGCGTGGC CGCGCATGCG CCGCTCGCGC AGCGGCATCA CATCGATCTC GGCTTCGAGG AGACCTGCGC GGCGACCGTC GTCGCCGACG TCGGCGCGCT GCGCGTGATG TTCGGCAACC TGCTCGACAA CGCGGTGAAG TACACGCCCG ACGGCGGCCG CATCGACGTG TCACTGACGC GCGACGCGGC CGGCCGCGCG TGCGTGCAGA TCGGCGACAG CGGGCCCGGT ATCCCGGCCG ACGAGCGCGA GCGCGTGTTC GACCGCTTCT ACCGCGACAG CTCCGCGCGG GCGCGTGCCG ACGTGTCGGG CAGCGGGCTC GGGCTCGCGA TCGTCAAGCG CGTGGCGGCG CAGCAGGGCG CGACGGTGTC GCTCGGCGAC GCGGCCGCGG GCGGCCTGCT CGTGAGCGTC GTGTTCGGCG ACGCCGAGAT GCCGGCGCAG CCTTCCGAAT CCGCATGA
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Protein sequence | MRSIRHQLLI WLLAIVVAGV GLAGWLIYRQ ALAEANELFD YQLQEIAAAL PSEPFSQVFG SRTNGDEGIV IQIWNRNGVL MYFSHPRAPI APRAELGFST ERTDRGEWRV YGAIVGDNVV QLAQPLSVRN RLAANVALRT LWPLIVLLPF LGAAVWMIVG RGLAPLARVT RAVEARRPEA LDPLHDAGLP LEVQPLVRAL NGLLARLSAA LDTQKAFVAD AAHELRTPLA AVQIQAQLVA RAKDDTSRRE AIADLQDGVS RATRLTEQLL ALARAEPDGA TMREPVDLQA LLVECVAAHA PLAQRHHIDL GFEETCAATV VADVGALRVM FGNLLDNAVK YTPDGGRIDV SLTRDAAGRA CVQIGDSGPG IPADERERVF DRFYRDSSAR ARADVSGSGL GLAIVKRVAA QQGATVSLGD AAAGGLLVSV VFGDAEMPAQ PSESA
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