Gene BamMC406_2537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2537 
Symbol 
ID6178650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2817440 
End bp2818777 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content72% 
IMG OID641682312 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001809230 
Protein GI172061578 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.246285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTCGA TTCGTCATCA ATTGCTGATC TGGCTGCTCG CGATCGTCGT CGCGGGCGTG 
GGCCTCGCGG GCTGGCTGAT CTACCGGCAG GCGCTCGCCG AAGCGAACGA GCTGTTCGAC
TACCAGCTGC AGGAAATCGC CGCGGCGCTG CCGTCGGAGC CGTTCTCGCA GGTGTTCGGC
TCGCGCACCA ACGGCGACGA AGGCATCGTG ATCCAGATCT GGAACCGCAA CGGCGTGCTG
ATGTACTTCT CGCATCCGCG CGCGCCGATC GCGCCGCGCG CGGAACTCGG CTTCTCGACC
GAGCGCACCG ATCGCGGCGA ATGGCGCGTG TACGGCGCGA TCGTCGGCGA CAACGTCGTG
CAGCTCGCGC AGCCGCTGTC GGTGCGCAAC CGGCTCGCGG CGAACGTCGC ACTGCGCACG
CTGTGGCCGC TGATCGTGCT GCTGCCGTTC CTCGGCGCGG CGGTCTGGAT GATCGTCGGG
CGCGGGCTCG CGCCGCTCGC CCGCGTGACG CGCGCGGTCG AGGCGCGCCG GCCGGAAGCG
CTCGATCCCT TGCACGATGC GGGCCTGCCG CTCGAGGTGC AGCCGCTCGT GCGCGCGCTG
AACGGGCTGC TCGCGCGGCT GTCGGCGGCG CTCGACACGC AGAAGGCCTT CGTCGCCGAT
GCCGCGCACG AACTGCGCAC GCCGCTCGCG GCCGTGCAGA TCCAGGCGCA GCTCGTCGCC
CGCGCGAAGG ACGATACGTC GCGTCGCGAG GCGATCGCGG ATCTCCAGGA CGGCGTGTCG
CGCGCGACGC GTCTCACCGA GCAACTGCTC GCGCTCGCGC GCGCCGAACC GGACGGCGCG
ACGATGCGCG AGCCGGTCGA TCTGCAGGCG CTGCTCGTCG AATGCGTGGC CGCGCATGCG
CCGCTCGCGC AGCGGCATCA CATCGATCTC GGCTTCGAGG AGACCTGCGC GGCGACCGTC
GTCGCCGACG TCGGCGCGCT GCGCGTGATG TTCGGCAACC TGCTCGACAA CGCGGTGAAG
TACACGCCCG ACGGCGGCCG CATCGACGTG TCACTGACGC GCGACGCGGC CGGCCGCGCG
TGCGTGCAGA TCGGCGACAG CGGGCCCGGT ATCCCGGCCG ACGAGCGCGA GCGCGTGTTC
GACCGCTTCT ACCGCGACAG CTCCGCGCGG GCGCGTGCCG ACGTGTCGGG CAGCGGGCTC
GGGCTCGCGA TCGTCAAGCG CGTGGCGGCG CAGCAGGGCG CGACGGTGTC GCTCGGCGAC
GCGGCCGCGG GCGGCCTGCT CGTGAGCGTC GTGTTCGGCG ACGCCGAGAT GCCGGCGCAG
CCTTCCGAAT CCGCATGA
 
Protein sequence
MRSIRHQLLI WLLAIVVAGV GLAGWLIYRQ ALAEANELFD YQLQEIAAAL PSEPFSQVFG 
SRTNGDEGIV IQIWNRNGVL MYFSHPRAPI APRAELGFST ERTDRGEWRV YGAIVGDNVV
QLAQPLSVRN RLAANVALRT LWPLIVLLPF LGAAVWMIVG RGLAPLARVT RAVEARRPEA
LDPLHDAGLP LEVQPLVRAL NGLLARLSAA LDTQKAFVAD AAHELRTPLA AVQIQAQLVA
RAKDDTSRRE AIADLQDGVS RATRLTEQLL ALARAEPDGA TMREPVDLQA LLVECVAAHA
PLAQRHHIDL GFEETCAATV VADVGALRVM FGNLLDNAVK YTPDGGRIDV SLTRDAAGRA
CVQIGDSGPG IPADERERVF DRFYRDSSAR ARADVSGSGL GLAIVKRVAA QQGATVSLGD
AAAGGLLVSV VFGDAEMPAQ PSESA