| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2529 |
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| Symbol | |
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| ID | 6178791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2809723 |
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| End bp | 2811021 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682304 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001809222 |
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| Protein GI | 172061570 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.210606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTCG AACGGGTTCC ATACCGCTTG ATCACTGTCG CGGCAGCCGC GGTTTTCCTG
GCTGCCTGCG GAAAAAAAGA ATCGGCACCG CCGCCGCAAA CGCCGGAAGT CGGTGTCGTC
ACCGTCCAGC CGCAAGCCGT CCCGGTCTTC ACCGAACTGC CGGGCCGCAC CAGCGCCTTC
CTCGTCGCGC AAGTGCGTGC ACGGGTCGAC GGCATCGTGC TGCGCCGTGA ATTCACCGAA
GGCGGCGACG TCAAGGCCGG CCAGCGCCTC TACAAGATCG ACCCGGCACC GTACATCGCT
CAACTGAACA GCGCGAAGGC GACGCTCGCG AAGGCGCAGG CGAACCTCGT CACGCAGAAC
GCGCTCGTCG CGCGCTACAA GGTGCTGGTG GCCGCGAACG CGGTCAGCAA GCAGGAATAC
GACAACGCGG TGGCCACGCA AGGCCAGGCC GCGGCGGACG TCGCGGCCGG CAAGGCAGCG
GTCGATACCG CGCAGATCAA CCTCGGCTAT ACGGACGTCG TGTCGCCGAT CAGCGGCCGC
GTCGGCATTT CGCAGGTCAC GCCGGGCGCC TACGTGCAGG CGAGCCAGGC GACGTTGATG
TCGACGGTGC AGCAGCTCGA TCCGGTCTAT GTCGACCTGA CGCAGTCGAG CCTCGACGGG
CTGAAGCTGC GCCAGGACGT GCAGAGCGGC CGCCTGAAGA CGAGCGGCCC GGGCGCGGCG
AAGGTGTCGC TGATCCTCGA GGACGGCAAG ACCTATTCCG ACGCCGGCAA GCTGCAGTTT
TCCGACGTCA CGGTCGACCA GACGACGGGC TCGGTGACGA TCCGCGCGGT ATTCCCGAAC
CCGGGCCGCG TGCTGCTGCC CGGGATGTTC GTGCGCGCAC GGATCGAGGA AGGCGTGAAC
GAGAACGCGT TCCTGGTGCC GCAGATCGGC GTCACGCATG ACGCGAAGGG CCAGCCGGTC
GCGCTGGTCG TGAACGCGAG CAACAAGGTC GAGCCGCGTC CGCTGAAGAC GACCGGCATG
CAAGGTCAGA ACTGGATCGT CGAAGGCGGC CTGCAAGCGG GCGACCGCGT GATCGTGCAG
GGCGTCGAGA AGGTTCGTCC GGGCGCGACG GTGAAGTCGG TCGCCGCGCA GTTGCCGGCC
GCCGACGCCG CATCGGGTGC AGCCGTATCC GCCGCGCCGG CCGCTGCCGC GTCGGGCGCC
GCTGTGTCGG GCGCTGGTGC GTCGGGTGCT GCCGCTTCGG GTGCCGCCGC ATCGGGCGCA
GCGCCGGCGA GCGCCGCCGC CGCTTCGAGC GCGAAATAA
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| Protein sequence | MRVERVPYRL ITVAAAAVFL AACGKKESAP PPQTPEVGVV TVQPQAVPVF TELPGRTSAF
LVAQVRARVD GIVLRREFTE GGDVKAGQRL YKIDPAPYIA QLNSAKATLA KAQANLVTQN
ALVARYKVLV AANAVSKQEY DNAVATQGQA AADVAAGKAA VDTAQINLGY TDVVSPISGR
VGISQVTPGA YVQASQATLM STVQQLDPVY VDLTQSSLDG LKLRQDVQSG RLKTSGPGAA
KVSLILEDGK TYSDAGKLQF SDVTVDQTTG SVTIRAVFPN PGRVLLPGMF VRARIEEGVN
ENAFLVPQIG VTHDAKGQPV ALVVNASNKV EPRPLKTTGM QGQNWIVEGG LQAGDRVIVQ
GVEKVRPGAT VKSVAAQLPA ADAASGAAVS AAPAAAASGA AVSGAGASGA AASGAAASGA
APASAAAASS AK
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