Gene BamMC406_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2514 
Symbol 
ID6178677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2792777 
End bp2793553 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content69% 
IMG OID641682290 
Productsorbitol dehydrogenase 
Protein accessionYP_001809208 
Protein GI172061556 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.449953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACTGG AACAGAAGGT CGCGATCCTG ACGGGCGCGG CAAGCGGCAT CGGCGAGGCG 
GTCGCGCAAC GCTATCTGGA CGAAGGCGCG CGCTGCGTGC TGGTCGACGT GAAGCCGGCT
AGCGGTTCGC TCGCACGATT GATCGAGGCC AGTCCCGGCC GCGCGGTGGC CGTCACCGCG
GACGTCACGC GTCGCGACGA CATCGAGCGG ATCGTCGCCA CCGCGGTCGA GCGCTTCGGC
GGCGTCGACA TCCTGTTCAA CAACGCGGCG CTGTTCGACA TGCGCCCGCT CCTCGACGAA
TCCTGGGACG TGTTCGACCG GCTGTTCGCG GTCAACGTGA AAGGGCTGTT CTTCCTGATG
CAGGCCGTGG CGCAGCGGAT GGTCGAGCAG GGCCGCGGCG GCAAGATCGT CAACATGTCG
TCGCAGGCAG GGCGTCGCGG CGAGGCGCTC GTTTCGCACT ACTGCGCGAC CAAGGCCGCG
GTGATCAGCT ACACGCAGTC GGCCGCGCTC GCGCTCGCGC CGCACCGGAT CAACGTGAAC
GGCATCGCGC CGGGCGTGGT CGACACGCCG ATGTGGGAGC AGGTCGATGC GCTGTTCGCG
CGCTACGAGC ATCGCCCGCC CGGCGAGAAG AAGCGGCTCG TCGGCGAGGC CGTGCCGCTC
GGCCGGATGG GCGTGCCGGG CGACCTGACG GGCGCCGCGC TGTTCCTCGC GTCGGCCGAT
GCCGACTACA TCACCGCCCA GACGCTGAAC GTCGACGGCG GCAACTGGAT GAGCTGA
 
Protein sequence
MRLEQKVAIL TGAASGIGEA VAQRYLDEGA RCVLVDVKPA SGSLARLIEA SPGRAVAVTA 
DVTRRDDIER IVATAVERFG GVDILFNNAA LFDMRPLLDE SWDVFDRLFA VNVKGLFFLM
QAVAQRMVEQ GRGGKIVNMS SQAGRRGEAL VSHYCATKAA VISYTQSAAL ALAPHRINVN
GIAPGVVDTP MWEQVDALFA RYEHRPPGEK KRLVGEAVPL GRMGVPGDLT GAALFLASAD
ADYITAQTLN VDGGNWMS