Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2514 |
Symbol | |
ID | 6178677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2792777 |
End bp | 2793553 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641682290 |
Product | sorbitol dehydrogenase |
Protein accession | YP_001809208 |
Protein GI | 172061556 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.449953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGACTGG AACAGAAGGT CGCGATCCTG ACGGGCGCGG CAAGCGGCAT CGGCGAGGCG GTCGCGCAAC GCTATCTGGA CGAAGGCGCG CGCTGCGTGC TGGTCGACGT GAAGCCGGCT AGCGGTTCGC TCGCACGATT GATCGAGGCC AGTCCCGGCC GCGCGGTGGC CGTCACCGCG GACGTCACGC GTCGCGACGA CATCGAGCGG ATCGTCGCCA CCGCGGTCGA GCGCTTCGGC GGCGTCGACA TCCTGTTCAA CAACGCGGCG CTGTTCGACA TGCGCCCGCT CCTCGACGAA TCCTGGGACG TGTTCGACCG GCTGTTCGCG GTCAACGTGA AAGGGCTGTT CTTCCTGATG CAGGCCGTGG CGCAGCGGAT GGTCGAGCAG GGCCGCGGCG GCAAGATCGT CAACATGTCG TCGCAGGCAG GGCGTCGCGG CGAGGCGCTC GTTTCGCACT ACTGCGCGAC CAAGGCCGCG GTGATCAGCT ACACGCAGTC GGCCGCGCTC GCGCTCGCGC CGCACCGGAT CAACGTGAAC GGCATCGCGC CGGGCGTGGT CGACACGCCG ATGTGGGAGC AGGTCGATGC GCTGTTCGCG CGCTACGAGC ATCGCCCGCC CGGCGAGAAG AAGCGGCTCG TCGGCGAGGC CGTGCCGCTC GGCCGGATGG GCGTGCCGGG CGACCTGACG GGCGCCGCGC TGTTCCTCGC GTCGGCCGAT GCCGACTACA TCACCGCCCA GACGCTGAAC GTCGACGGCG GCAACTGGAT GAGCTGA
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Protein sequence | MRLEQKVAIL TGAASGIGEA VAQRYLDEGA RCVLVDVKPA SGSLARLIEA SPGRAVAVTA DVTRRDDIER IVATAVERFG GVDILFNNAA LFDMRPLLDE SWDVFDRLFA VNVKGLFFLM QAVAQRMVEQ GRGGKIVNMS SQAGRRGEAL VSHYCATKAA VISYTQSAAL ALAPHRINVN GIAPGVVDTP MWEQVDALFA RYEHRPPGEK KRLVGEAVPL GRMGVPGDLT GAALFLASAD ADYITAQTLN VDGGNWMS
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