| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2510 |
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| Symbol | |
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| ID | 6178615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2787914 |
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| End bp | 2788861 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682286 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001809204 |
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| Protein GI | 172061552 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00397469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.324335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCATT TGCGTCTTCC CCTGAGCCAC GCGCCGTCGG TCGGCGACGC GTCGTCGCCG
CCGGGCGCGC CGCGCCGCGT GCGCGGCGGC CCGAGCTGGC TCGTGTCGCC GTCCGTCGCC
GTGCTGCTGC TGTGGATGTC GATTCCGCTT GCGATGACGA TCTGGTATTC GTTCTCGCGC
TACAACCTGC TGAACCCGGA CGTGAAGGGC TTCGCCGGGC TCGACAACTA CCGCTTCCTC
GCGACCGATC CGTCGTTCCT GCCCGCGATC TGGCATACGC TCGTGCTGAT CGGCGCGGTG
CTCGCGATCA CGGTGGTCGG CGGTGTGCTG ATGGCCGTGC TGTTCGACCG CAAGTTCTAC
GGGCAGGGCA TCGCGCGGCT GCTCGCGATC GCGCCGTTCT TCGTGATGCC GACGGTCGCC
GCGCTGATCT GGAAGAACAT GATCCTCCAT CCGGTGTACG GGCTCGTCGC GAACGCAATG
CGCGCGCTCG GGATGACGCC GGTCGACTGG TTCGCCGACT ACCCGCTCAC CGCCGTGATC
ATGATCGTCG CGTGGCAGTG GCTGCCGTTC GCGTTCCTGA TCCTGTTCAC CGCGATCCAG
TCGCTCGACC AGGAGCAGAA GGAAGCCGCC CGCATCGACG GCGCGGGCCC GATCGCGATG
TTCTTCTACA TCACGCTGCC GCACCTGAAG CGCGCGATCG CCGTGGTCGT GATGATGGAG
ACGATCTTCC TGCTGTCGAT CTTCGCGGAG ATCTACACGA CGACGGGCGG CGGCCCGGGC
AATGCGACGA CCAACCTGTC GTACCTGATC TACGCGCTCG GCCTGCAGCA GTTCGACGTC
GGCCTCGCGT CCGCGGGCGG GATCATCGCC GTCGTGGTCG CGAACGTCGT GTCGTTCTTC
CTGGTGCGGA TGCTCGCGCG CAACCTGAAA GGGGAGTACG AAAAATGA
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| Protein sequence | MRHLRLPLSH APSVGDASSP PGAPRRVRGG PSWLVSPSVA VLLLWMSIPL AMTIWYSFSR
YNLLNPDVKG FAGLDNYRFL ATDPSFLPAI WHTLVLIGAV LAITVVGGVL MAVLFDRKFY
GQGIARLLAI APFFVMPTVA ALIWKNMILH PVYGLVANAM RALGMTPVDW FADYPLTAVI
MIVAWQWLPF AFLILFTAIQ SLDQEQKEAA RIDGAGPIAM FFYITLPHLK RAIAVVVMME
TIFLLSIFAE IYTTTGGGPG NATTNLSYLI YALGLQQFDV GLASAGGIIA VVVANVVSFF
LVRMLARNLK GEYEK
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