| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2449 |
|---|
| Symbol | |
|---|
| ID | 6178290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2724486 |
|---|
| End bp | 2725331 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641682225 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_001809143 |
|---|
| Protein GI | 172061491 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000271935 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA CGATCGCCAC GGTCGTCCTG CCGGACGGCG AGACGATTCC GAAGCTCGGC
CTGGGCACTT GGGAAATGGG CGAGCGCCCC GCGCGCCGCG CCGACGAGAT CGCCGCATTG
CGCGAGGGGA TCGCGCTCGG GATGACGCTC GTCGACACCG CCGAGATGTA CGGCGACGGC
GCGACCGAGG AACTCGTCGG CGACGCGCTG GCCGGCCTGC GCGACGACGT GTTCCTCGTC
AGCAAGGTGT ATCCGCATCA TGCGAGCCGG CGTGGCGTCG TCGCCGCGTG CGAGGCGAGC
CTCGAGCGTT TGAGTACCGA TCGTCTCGAC CTGTACCTGC TGCACTGGCG CGGTTCGGTG
CCGCTCGAGG AGACGGTCGA GGGATTCGAG GCGTTGCGGC GCGCGGGCAA GATCCGGCAC
TGGGGCGTCA GCAACTTCGA TACGGCCGAC ATGGCCGAGC TCGTCGACGA GGCGGGCGGC
GGCGCGTGCG CGACCAACCA GATCCTCTAC AACATCGCGC GGCGTGGTCC GGAATTCGAC
CTGCTGCCGT GGCTCGCCGA CCACCGGATA CCCGCGATGG CCTACAGCCC CGTCGATCAC
GGGCGGCTGC CGAAGCGCTC GCCGCTCGAC GAGATCGCGC GGCAGCGCGG CGTGTCGGTG
ACGCGTGTCG CGCTTGCCTG GGTGCTCGCG CAACCGGGTG TGTTCGCGAT TCCGAAGGCG
TCGCGGATCG AGCACGTGCG CGACAATCGT GCGGCGCTCG ATCTCGTGTT GAGCGATGAC
GAGCGCGCGC AGATCGACGG TTACTTCCGT CCGCCGCGCA GCAAGCGCGC GCTCGAAATG
CTCTGA
|
|---|
| Protein sequence | MTDTIATVVL PDGETIPKLG LGTWEMGERP ARRADEIAAL REGIALGMTL VDTAEMYGDG
ATEELVGDAL AGLRDDVFLV SKVYPHHASR RGVVAACEAS LERLSTDRLD LYLLHWRGSV
PLEETVEGFE ALRRAGKIRH WGVSNFDTAD MAELVDEAGG GACATNQILY NIARRGPEFD
LLPWLADHRI PAMAYSPVDH GRLPKRSPLD EIARQRGVSV TRVALAWVLA QPGVFAIPKA
SRIEHVRDNR AALDLVLSDD ERAQIDGYFR PPRSKRALEM L
|
|---|
| |