| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2442 |
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| Symbol | |
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| ID | 6177181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2713690 |
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| End bp | 2715918 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682218 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001809136 |
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| Protein GI | 172061484 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000648853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCCACTT CGCCCAAGAT CATCTATACC CTCACCGACG AAGCGCCTGC GCTCGCGACC
TATTCGCTGC TGCCGATCGT CAAGGCCTTC ACGCGCTCGT CCGGCGTCGC CGTCGAAACG
CGCGACATCT CGCTCGCCGG CCGCATCATC GCGGCATTCG CCGACGTCCT GCCGCCGGAG
CAGAAGGGTT CCGACGATCT GGCCGAGCTG GGCCAGCTCA CGCTGAAGCC GGAAGCGAAC
ATCATCAAGC TGCCGAACAT CAGCGCATCG GTGCCGCAGC TCAAGGCCGC GATCGCGGAA
CTGCAGGCGC AGGGCTACAA GCTGCCGGCG TATCCGGAAG ATCCGTCGAC CGACGAAGAG
AAGGCGGTCA AGGCCCGCTA CGACAAGATC AAGGGCAGCG CGGTGAACCC GGTGCTGCGC
GAGGGCAACT CGGATCGCCG CGCGCCGCTG TCGGTGAAGA ACTACGCCCG CAAGCACCCG
CACAAGATGG GCGCATGGAA GGCCACGTCG AAGGCGCACG TCGCGCACAT GACCGAAGGC
GACTTCTACG GCAGCGAAAA GTCGGCGCTT GTCGCCGCGG CCGGCAGCGT GAAGATCGAA
CTCACGACGA CCGACGGCGT GAAGAAGGTG CTGAAGGAAA AGACGGCCGT GAAGGCCGAT
GAAATCATCG ATGCATCGGT GATGAGCCGC AAGGCGCTGC GCAGCTTCAT CGAAGCGCAG
ATCGCCGACG CGAAGGCGCA GGACGTGCTG TTCTCGGTGC ACCTGAAGGC GACCATGATG
AAGGTCTCGG ACCCGATCCT GTTCGGTCAC TTCGTATCGG TGTTCTACAG CGACGCGCTC
ACCAAGCACG CGGACGTGCT CGCGAAACTC GGCTTCAACC CGAACAACGG GATCGGCGAC
CTGTACGCAC GCCTGAAGGA TCTGCCGGCC GACACGCGCG AAGCGATCGA AGCCGACGTC
AAGGCCGAGT ACGCAGTGCG CCCGCGTCTC GCGATGGTCA ACTCGGACAA GGGCATCACG
AACCTGCACG TGCCGAGCGA CGTGATCGTC GACGCATCGA TGCCGGCGAT GATCCGCGAC
TCGGGCGGCA TGTGGGGCCC GGACGGCGAA CTGTCCGACG CGAAGGCCGT GATTCCGGAC
CGCTGCTACG CGGGCGTCTA TCAGGCCGTG ATCGAAGACT GCAAGCAGCA CGGCGCATTC
GACCCGGTCA CGATGGGCAG CGTGCCGAAC GTCGGCCTGA TGGCGCAGGC GGCCGAGGAA
TACGGTTCGC ACGACAAGAC GTTCCTGATC CCGGCCGATG GCGTCGTGCG CGTCACGGAC
GAGGCCGGCA ACGTGCTGCT CGAGCACGCG GTCGAGTCGG GCGACATCTG GCGCATGTGC
CAGACGAAGG ACGCACCGGT GCAGGACTGG GTCAAGCTCG CGGTGAACCG TGCCCGCGCG
ACCGGCGCGC CGGCCGTCTT CTGGCTCGAT CCGGCACGTG CGCACGACGC GCAGATCATC
GCGAAGGTCG AACGCTACCT GAAGGATCAC GACACGAACG GCCTCGACAT TCGCATCATG
ACGCCGGTCG ACGCGACGCG TTTCTCGCTC GAGCGCATCC GCGCGGGCAA GGACACGATC
TCGGTCACGG GCAACGTGCT GCGCGACTAC CTGACCGACC TGTTCCCGAT CATGGAACTC
GGCACCAGCG CGAAGATGCT GTCGATCGTG CCGCTGATGG CCGGCGGCGG GATGTTCGAA
ACGGGCGCCG GCGGCTCGGC ACCGAAGCAC GTTCAGCAGT TCGTCGAGGA AGGCTTCCTG
CGCTGGGATT CGCTGGGCGA ATTCCTGGCA CTGGCCGCGT CGCTCGAACA CCTCGGCCAC
GCTTACCAGA ACCCGAAGGC GCTCGTGCTC GCGAAGACGC TCGACCAGGC GACCGGCAAG
TTCCTGGACG AGAACAAGTC GCCCGCACGC AAGGTCAGCG GCCTCGACAA CCGCGGCAGC
CACTTCTACC TGTGCCTGTA CTGGGCGCAG GCGCTGGCCG AGCAGACCGA CGATGCCGCG
CTGAAGGCGC AGTTCGAAGG CGTCGCGAAG TCGCTGTCCG CCAGCGAAGC GCGCATCCTG
GAAGAACTGT CGGCCGCGCA GGGCACCGCG CAGGCGATCG GCGGCTACTA CCGTCCGAAC
GTCGAGCTGA CGAGCCAGGC GATGCGCCCG AGCGCAACGC TGAACGCCAT CGTCGACGCA
GTCGCCTGA
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| Protein sequence | MSTSPKIIYT LTDEAPALAT YSLLPIVKAF TRSSGVAVET RDISLAGRII AAFADVLPPE
QKGSDDLAEL GQLTLKPEAN IIKLPNISAS VPQLKAAIAE LQAQGYKLPA YPEDPSTDEE
KAVKARYDKI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWKATS KAHVAHMTEG
DFYGSEKSAL VAAAGSVKIE LTTTDGVKKV LKEKTAVKAD EIIDASVMSR KALRSFIEAQ
IADAKAQDVL FSVHLKATMM KVSDPILFGH FVSVFYSDAL TKHADVLAKL GFNPNNGIGD
LYARLKDLPA DTREAIEADV KAEYAVRPRL AMVNSDKGIT NLHVPSDVIV DASMPAMIRD
SGGMWGPDGE LSDAKAVIPD RCYAGVYQAV IEDCKQHGAF DPVTMGSVPN VGLMAQAAEE
YGSHDKTFLI PADGVVRVTD EAGNVLLEHA VESGDIWRMC QTKDAPVQDW VKLAVNRARA
TGAPAVFWLD PARAHDAQII AKVERYLKDH DTNGLDIRIM TPVDATRFSL ERIRAGKDTI
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGMFE TGAGGSAPKH VQQFVEEGFL
RWDSLGEFLA LAASLEHLGH AYQNPKALVL AKTLDQATGK FLDENKSPAR KVSGLDNRGS
HFYLCLYWAQ ALAEQTDDAA LKAQFEGVAK SLSASEARIL EELSAAQGTA QAIGGYYRPN
VELTSQAMRP SATLNAIVDA VA
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