| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2439 |
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| Symbol | |
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| ID | 6178254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2708442 |
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| End bp | 2710655 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682215 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_001809133 |
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| Protein GI | 172061481 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000109302 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000563921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAATAA TTAGTGGTCC GAATAATATG CGGAAAATGA AGGGCGGGCA CTCCGCTTCG
GATACCGCAC GCGTGCTCGC CAAGCGTGCG ATCGCGGTCG GTGTGACGGG CATGCTGGGA
TTGATGCTCG TAGACGCGAA CGCGCAAACG ATCGGCGAAC GGGTGGACTC GCTGGAAAGT
AGCGTGTCGA CGATCAACGG TAGGCTGTCG GGCCTGCAGA GCGATGTCTC GAACCTGAAG
AATCGTCTCG AAGGTTCGCT GCCGTCCCCC GGCACTGGCA AGGACAGTGT CGCGGTTGGC
AAGAGTTCGA ATGCATCCGG GGCGGGGAGT ACGGCAGTCG GTGTGAACGC ATCGGCAACC
GGCGACTCGA GCACGGCGAC GGGTGCAGAT TCGGAGGCGT CGGGCACGGA CAGCACGGCC
AACGGCGCAC GCTCGAAGGC GACCGGCGAT TCGAGCACGG CGACGGGTGC AGATTCGGAG
GCGTCGGGCA AGGACAGCAC GGCCAACGGC GCGCGCTCGA AGGCGACCGG CGATTCGAGC
ACGGCAACGG GTGCAGATTC GGAGGCGTCC GGCAAGGACA GCACAGCCAA CGGCGCGCGC
TCGAAGGCAA CCGGCGACTC GAGCACGGCG GCAGGTGCAG ATTCGCAGGC GTCGGGCAAG
GACAGCACGG CCAACGGCGC ACGCTCGAAG GCAACCGGCG ACTCGAGCAC GGCAGCAGGT
GCAGATTCGG AGGCGTCGGG CAAGGACAGC ACGGCCAACG GCGCACGCTC GAAGGCAACC
GGCGACTCGA GCACGGCAGC AGGTGCAGAT TCGGAGGCGT CGGGCAAGGA CAGCACGGCC
AACGGCGCAC GCTCGAAGGC AACCGGCGAC TCGAGCACGG CGGCAGGTGC AGATTCGGAG
GCATCGGGCA AGGACAGCAC GGCCAACGGC GCACGCTCGA AGGCAACCGG CGAATCGAGC
ACGGTGGCAG GTGCAGATTC GGAGGCGTCC GGCAAGGACA GCACGGCCAA CGGCGCACGC
TCGAAGGCAA CCGGCGACTC GAGCACGGCA GCAGGTGCAG ATTCGCAGGC GTCGGGCAAG
GACAGCGCAG CCAACGGCGC ACGCTCGAAG GCAACCGGCG ACTCGAGCAC GGCAGCAGGT
GCAGATTCGC AGGCGTCGGG CAAGGACAGC ACGGCCAACG GCGCGCGCTC GAAGGCAACC
GGCGACTCGA GCACGGCGGC AGGTGCAGAT TCGCAGGCGT CGGGCAAGGA CAGCACGGCC
AACGGCGCGC GCTCGAAGGC AACCGGCGAA TCGAGCACGG CAGCAGGTGC AGACGCGCAG
GCGTCGGGCA GGGACAGCAC GGCCAACGGC GCGCGCTCGA CGGCAACCGG CGAATCGAGC
ACGGCAGCAG GTGCAGACTC GCAGGCGTCG GGCAGGGACA GCACGGCCAA CGGCGCACGC
TCGAAGGCAA CCGGCGAATC GAGCACGGCA GGAGGTGCAG ATTCGGTGGC GTCGGGCAAG
GACAGCACGG CCAACGGCGC GCGCTCGAAG GCAACTGGCG ACTCGAGCAC GGTGGCAGGT
GCAGATTCGG AGGCGTCCGG CAAGGACAGC ACGGCCAACG GCGCGCGCTC GAAGGCAACC
GGCGACTCGA GCACGGCAGC AGGTGCAGAT TCGGAGGCGT CCGGAAAGGA CAGCACGGCA
ACCGGCGCGC GCGCGCGGGC GAGCGGCAGC GATTCGACGG CAATGGGCAC GAACGCAAAG
GCCCTCGGCG ACGGCAGCTC GAGCTTCGGC GCCGGGGCGT CCTCGTCAGG CACGAACAGC
ACGGCGCTCG GCACGAACGC GGTCGCGACC GGCCGGAATT CGGTTGCGCT CGGCCACGGC
TCGATTGCCG ATCGTGACGA CACCGTGTCG ATCGGGGCGC CGGGGCAAGA GCGCAAGCTC
GCGAACGTCG CCGACGCAGT TCTGCCTCAC GACGCGGTCA ACCTGAAGCA GTTGAACGCA
GTAGCCCGGC GCGCGTACAG CGGTGTGGCC GCGGCGACCG CATTGTCGAT GATTCCGGAT
GTCGATCTGG GCAAGACGAT CGCAGTGGGC GTCGGCATGG GCAGCTATCT CGGCTACCAG
GCCGTCGCGC TCGGCGCGTC GGTGCGGATC GGCGAAAACC TGAAGGTGCG CGCTGGAGCC
GGGATCAGTT CGGCTTCGAC GACGTGGGGT GCGGGCGCGT CGTACAGCTG GTAA
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| Protein sequence | MKIISGPNNM RKMKGGHSAS DTARVLAKRA IAVGVTGMLG LMLVDANAQT IGERVDSLES
SVSTINGRLS GLQSDVSNLK NRLEGSLPSP GTGKDSVAVG KSSNASGAGS TAVGVNASAT
GDSSTATGAD SEASGTDSTA NGARSKATGD SSTATGADSE ASGKDSTANG ARSKATGDSS
TATGADSEAS GKDSTANGAR SKATGDSSTA AGADSQASGK DSTANGARSK ATGDSSTAAG
ADSEASGKDS TANGARSKAT GDSSTAAGAD SEASGKDSTA NGARSKATGD SSTAAGADSE
ASGKDSTANG ARSKATGESS TVAGADSEAS GKDSTANGAR SKATGDSSTA AGADSQASGK
DSAANGARSK ATGDSSTAAG ADSQASGKDS TANGARSKAT GDSSTAAGAD SQASGKDSTA
NGARSKATGE SSTAAGADAQ ASGRDSTANG ARSTATGESS TAAGADSQAS GRDSTANGAR
SKATGESSTA GGADSVASGK DSTANGARSK ATGDSSTVAG ADSEASGKDS TANGARSKAT
GDSSTAAGAD SEASGKDSTA TGARARASGS DSTAMGTNAK ALGDGSSSFG AGASSSGTNS
TALGTNAVAT GRNSVALGHG SIADRDDTVS IGAPGQERKL ANVADAVLPH DAVNLKQLNA
VARRAYSGVA AATALSMIPD VDLGKTIAVG VGMGSYLGYQ AVALGASVRI GENLKVRAGA
GISSASTTWG AGASYSW
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