| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2435 |
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| Symbol | |
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| ID | 6177422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2703348 |
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| End bp | 2704727 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682211 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001809129 |
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| Protein GI | 172061477 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0155643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000341886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGACACAAC AACAACGGTC GTTCGACAAC ATCGTCGCGC GCGAACAAGG GTTGCGCCAC
GCGCTGACGT CGGGGCAGAT GGCAATGATC GCGATCGGCG GCGCGATCGG CACGGGGCTG
TTCCTCGGCA GCGGGTTCGC GATCGGGCTC GCCGGCCCGA GCGTGCTGCT CTCGTATGCG
ATCGGCGCGC TGATTGCGCT GCTGCTGATG GGCGCGCTCG CGGAAATGAC GGTCGCGCAT
CCGACGGCCG GTTCGTTCGG CGCATACGCC GAGCACTACG TCGGCCCGCT CGCGGGCTTT
CTCGTGCGCT ATGCGTACTG GTTCGCGGTG GTGTTCGCGA TCGGTACCGA GATCAGCGCG
ATCGCCGTCT TCATGAAGTA CTGGTTCCCG GCCGTGCCCG GCTGGTACTG GGTGATCGGC
TTCTCCGCGC TGCTGATCGC GGTGAACCTC GCGAGCGTCA CGCTGTACGG GTCGGTCGAA
TACGCGTTTT CGTTGCTGAA GATCGCGGCG ATCGTCGTGT TCATCGTGCT CGGCGCGTAT
CTCGTGTGGT CGGCGCCGGC GGCTGCCGGC ATCGGCTTCG CGAACTACAC CGCGCACGAC
GGCTTCATGC CGAAAGGGCC GTGGGGCACC TGGGTCGCGG TGATCGTCGC GATCTTCAGC
TACATGAGCA TCGAGGCGGT CGCGATCGCG GCCGGCGAGG CGCGTGATCC GCAGCATGCG
GTCACGCGTG CATTCCGCTC GACGGTGTTC CGGCTCGTGC TGTTCTACCT GCTGACGCTG
TCGCTGATGC TCGCGATCGT GCCCTGGACG CAGGCCGGCA CCGACGAAAG CCCGTTCGTG
AAGGTGATGG CTGCCACCCA CGTGCCGTAT GCGGCCGGCG TGATCAACTT CGTGCTGCTG
ATCGCCGCGC TGTCGGCGAT GAACAGCCAG CTCTACGTGA CGACGCGGAT GATGTTCAGC
CTGTCGCGTG CGCGGCTCGC GCCGGCGGTG TTCGGCCGGC TCGGCAACAA CGGCGTGCCG
CGTGCGGCGC TGTGGATCTC GACCAGCGGC GTCGCGGTCG CGGCCGTGAT GGTCGCGCTG
TCGCCCGACA CCGCGTTTAC CGTGATGATG GCGATCGCGA TGTTCGGCGC GCTGTTCACG
TGGCTGATGA TCTTCGTCAC GCACCTGCGC TTTCGCGCGC GGTATCGCGG CCCGGCGCTC
GCATTCCGGA TGTGGGGCCA CCCGTTCGGC AGCGTGCTCG GTGCGGGGCT CGTGGGCGCA
GTCCTGCTCA CGACCGCGTT CACGCGCGAA TTCCGGATGA CGATGGTGGT CGGCGTCGTG
TTCGTCGTGC TGCTGACGGT CGCGTACGCG TTGCACTACC GGCATCAGCA CGCGCGTTGA
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| Protein sequence | MTQQQRSFDN IVAREQGLRH ALTSGQMAMI AIGGAIGTGL FLGSGFAIGL AGPSVLLSYA
IGALIALLLM GALAEMTVAH PTAGSFGAYA EHYVGPLAGF LVRYAYWFAV VFAIGTEISA
IAVFMKYWFP AVPGWYWVIG FSALLIAVNL ASVTLYGSVE YAFSLLKIAA IVVFIVLGAY
LVWSAPAAAG IGFANYTAHD GFMPKGPWGT WVAVIVAIFS YMSIEAVAIA AGEARDPQHA
VTRAFRSTVF RLVLFYLLTL SLMLAIVPWT QAGTDESPFV KVMAATHVPY AAGVINFVLL
IAALSAMNSQ LYVTTRMMFS LSRARLAPAV FGRLGNNGVP RAALWISTSG VAVAAVMVAL
SPDTAFTVMM AIAMFGALFT WLMIFVTHLR FRARYRGPAL AFRMWGHPFG SVLGAGLVGA
VLLTTAFTRE FRMTMVVGVV FVVLLTVAYA LHYRHQHAR
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