| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2420 |
|---|
| Symbol | rpmB |
|---|
| ID | 6177032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 2686634 |
|---|
| End bp | 2686867 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641682196 |
|---|
| Product | 50S ribosomal protein L28 |
|---|
| Protein accession | YP_001809114 |
|---|
| Protein GI | 172061462 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0227] Ribosomal protein L28 |
|---|
| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.127484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000900978 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCG TATGCCAAGT AACTGGGAAA GCGCCGATGA GCGGCAACAA CGTTTCCCAC
GCCAACAACA AGACCAAGCG TCGCTTCCTG CCGAACCTGC AAAACCGCCG GTTCTGGGTA
GAGAGCGAAA ACCGCTGGGT GCGCCTGCGC GTCTCGAACG CCGGCCTGCG CCTGATCGAC
AAGAACGGCA TCGATTCCGT GCTCGCTGAC CTGCGCGCAC GCGGCGAAGC CTAA
|
|---|
| Protein sequence | MARVCQVTGK APMSGNNVSH ANNKTKRRFL PNLQNRRFWV ESENRWVRLR VSNAGLRLID
KNGIDSVLAD LRARGEA
|
|---|
| |