| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2404 |
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| Symbol | |
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| ID | 6176990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2671921 |
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| End bp | 2672694 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682180 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001809098 |
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| Protein GI | 172061446 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0875536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.494968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGACTC ACACGCTCGC AGACAAGGTC GTCCTGATCG CAGGCGGCGC CAAGAATCTC
GGTGGCCTGA TCGCCCGGGA CCTGGCTGGC CACGGCGCGA AGGCGGTGGC GATTCACTAC
AACAGCGCGG CGTCGCAGGC GCAGGCCGAA GAGACGGCTG CCGCCGTGCG CGCGGCCGGC
GCGCAAGCCG CGACGTTCCA GGCCGACCTG ACGACGGCCG CTGCAGTCGA GAAACTGTTC
GACGACGCGA AGCAGCGCTT CGGCAAGATC GACATCGCGA TCAATACCGT CGGCAAGGTG
CTGAAGAAGC CGTTCACCGA CATCTCCGAG GCCGAATACG ACGAGATGTT CGCGGTGAAC
AGCAAGTCGG CGTTCTTCTT CATCAAGGAG GCGGGGCGGC ACCTCGAGGA TCACGGCAAG
CTCGTCACGC TCGTGACGTC GCTGCTCGGC GCGTTCACGC CGTTCTATGC GGCCTACGAA
GGGTCGAAGG CGCCGGTCGA GCACTTCACG CGCGCCGCGT CGAAGGAGTA CGGCGCGCGC
GGCATCTCGG TGACGGCGGT CGGGCCCGGT CCGATGGACA CGCCGTTCTT CTATCCGGCC
GAAGGCGCCG ACGCGGTCGC GTATCACAAG ACGGCGGCCG CGCTGTCGCC GTTCAGCAAG
ACGGGCCTCA CCGACATCGA GGACGTCGTG CCGTTCATCC GTCATCTCGT GACCGACGGC
TGGTGGATCA CCGGCCAGAC GATCCTGATC AACGGCGGCT ATACGACCAA GTAA
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| Protein sequence | MATHTLADKV VLIAGGAKNL GGLIARDLAG HGAKAVAIHY NSAASQAQAE ETAAAVRAAG
AQAATFQADL TTAAAVEKLF DDAKQRFGKI DIAINTVGKV LKKPFTDISE AEYDEMFAVN
SKSAFFFIKE AGRHLEDHGK LVTLVTSLLG AFTPFYAAYE GSKAPVEHFT RAASKEYGAR
GISVTAVGPG PMDTPFFYPA EGADAVAYHK TAAALSPFSK TGLTDIEDVV PFIRHLVTDG
WWITGQTILI NGGYTTK
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