Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2340 |
Symbol | |
ID | 6176693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2605691 |
End bp | 2606404 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641682114 |
Product | P pilus assembly protein chaperone PapD-like protein |
Protein accession | YP_001809034 |
Protein GI | 172061382 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.200473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATGGT TCCCGCGCGC ATTGGCCGCG CTGTGCGTCG TGTCGGCGTG CGCGGCCGCA TCCGCCGCCA CGCTGCAGAT CACGCCCGTG ACGATCGAGC TGGCGCCGTC GGCGGCCGCC GCGAGCATGA CGCTCAGCAA TCCTGGCGGA CAGCCGATCT ATGGCCAGGT CCGCACCTAT CGCTGGACGC AGCAAAACGG CGACGACGTG ATGACGCCGA CCGACATGCT CGCCGCGTCG CCGCCGCTGC TGCAGATCGG CGCGAACGCC GAGCAGCTGA TCCGGCTCGT GCGCACGGGC CGCGGCGCGC CGCCCGCCGA AGAAAGCTAT CGCGTGCTGA TCGATGAACT GCCCGCACCC GGCACGCCGG TCGCGAACGG CGTCACGATC CGGCTGCGCT ATTCCGTGCC CGTATTCGTC GAGCCCGATG GCGCACCGGT GTCGCCAATA CTTGACTGGC GCGTCGAGCG TGACGGCGCG GGCACACGGC TTGCGGTCGA CAACCACGGT GGACGGCGCG CGCAGATTTC CGCGGTTCGG CTCATCGACG CGCGCGGCAC CGTGCATGAC GTCACGCGCG GCCTGCTCGG CTATGCGCTC GCGGGCAGCA CGCGGCGCTG GCCGCTCAAG CTGGATGTGG GCCCGGCGAC GTTCGTCCGG ATCCAGGCGA CCGTCAACGC GCAGCCGGTC GAAGCGCGGC TGACACCGCC CTGA
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Protein sequence | MAWFPRALAA LCVVSACAAA SAATLQITPV TIELAPSAAA ASMTLSNPGG QPIYGQVRTY RWTQQNGDDV MTPTDMLAAS PPLLQIGANA EQLIRLVRTG RGAPPAEESY RVLIDELPAP GTPVANGVTI RLRYSVPVFV EPDGAPVSPI LDWRVERDGA GTRLAVDNHG GRRAQISAVR LIDARGTVHD VTRGLLGYAL AGSTRRWPLK LDVGPATFVR IQATVNAQPV EARLTPP
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