| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2334 |
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| Symbol | hemC |
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| ID | 6178114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2597739 |
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| End bp | 2598653 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641682108 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001809028 |
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| Protein GI | 172061376 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.350686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGCAAG CCGAACATGT GCGTGATGCG CTGCGCAAAT TATATCCAGC TTGCGACGTG
AAAATCCTCG GGATGACGAC CCGCGGCGAC CAGATTCTCG ATCGTACGCT GTCGAAGGTC
GGCGGCAAGG GCCTGTTCGT GAAGGAGCTG GAGAACGCGC TCGCCGACGG TCGCGCCGAC
CTGGCCGTGC ATTCGCTGAA GGACGTGCCG ATGGCGCTGC CCGACGGCTT CGCGCTCACC
GCGATCATGG AGCGCGAGGA TCCGCGCGAT GCGTTCGTGT CGAACGACTA CGCGTCGCTC
GACGCGCTGC CGGCCGGCGC CGTCGTCGGC ACGTCGAGCC TGCGCCGCGA GGCGATGCTG
CGCGCGCGCT ATCCGCACCT CGACGTGCTG CCGCTGCGCG GCAACCTCGA CACGCGCCTG
GCGAAGCTCG ATCGCGGCGA CTATGCGGCG ATCATTCTCG CGGCCGCAGG CCTCAAGCGC
CTCGGCCTCG AAGCGCGAAT CCGTACACTG ATCGACGTCG AGGACAGCCC GCCCGCCGCC
GGTCAGGGCG CGCTCGGCAT CGAAATCGCC GCGCACCGCA CCGACGTCGC CGCATGGCTC
GCACCGCTGC ACGACCCGAA GACCGCGCTC GCGGTCGAGG CCGAGCGGAT GGTGTCGCGC
GCACTCGGCG GCAGCTGCGA AGTGCCGCTC GCCGCGCACG CGGTATGGCG CGCCGGCGAG
CTGTACCTGA CGGGCCGCGT GTCGACGACC GACGGCCAGC GCGTGCTGAC CGCCGAGGAG
TGCGGCGCCG TCATGACCAT CGCCGATGCG CTCGCGCTCG GCCGCGCGGT GTCCGACGAG
CTCGAGGCGC AGGGCGCGCT CGACATCGTC AACGCACTGC TGGCCGCGTC GCAGGCCGGC
AAGGGCGACG CCTGA
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| Protein sequence | MWQAEHVRDA LRKLYPACDV KILGMTTRGD QILDRTLSKV GGKGLFVKEL ENALADGRAD
LAVHSLKDVP MALPDGFALT AIMEREDPRD AFVSNDYASL DALPAGAVVG TSSLRREAML
RARYPHLDVL PLRGNLDTRL AKLDRGDYAA IILAAAGLKR LGLEARIRTL IDVEDSPPAA
GQGALGIEIA AHRTDVAAWL APLHDPKTAL AVEAERMVSR ALGGSCEVPL AAHAVWRAGE
LYLTGRVSTT DGQRVLTAEE CGAVMTIADA LALGRAVSDE LEAQGALDIV NALLAASQAG
KGDA
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