Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2320 |
Symbol | |
ID | 6176721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2580734 |
End bp | 2581816 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641682095 |
Product | outer membrane protein (porin)-like protein |
Protein accession | YP_001809015 |
Protein GI | 172061363 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0798185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.76892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAG CTTTGGTCGC GGCCGCGCTG ATGGCTGCTG GGGTGGTTAC GGCGCACGCG CAGAGCAGCG TCACGCTGTA CGGTCGCCTG GATGCCGGCC TCGAGTACAT GAACGGCCTG CAGGACGGCC ATCGCTACCG GGCGGAGAGC GGCGACTGGG GCACGAGCCT GTGGGGCTTG AAGGGCAGCG AGGACATCGG CGGCGGCAAC AAGATCCTGT TCCACCTCGA AGGCGCGTTC AACACGATGA ACGGCGGGCT CGGCACGAGC GGCTCGATCT GGGATCGTTT CGCGACCGTC GGCATCTCCA ACGACCGCTA CGGTACGCTG CTGCTGGGTC GCGAACTCGC GATCGCGAAC GGCGTGTGGG ACTTCGATCC GCTGGGCCAG TCGAGCTGGT CGTCGGCATC GCTCGTGCGC GGCCGCAACT GGAACAAGAC CAGCAACAAC GTGTCGTACC AGTCGCCGCA GTTCTACGGC CTCGACTTCT ACGGCCAGTT CGCGTTCTCG AACTCGACAA GCTTCAACGG CAACACGACG GCCGGTCAGC CGGGCCGTGC GGCCGGTGCG CAGGTCACGT ACACGAACTC GCTGTTCCAG GTGCGCGGCA TCTACGACGA AACGCGCGAC AGCAACGGCC GCTTCTCCGA CGTGTTCAAC TATTCGCGTG AATACTTCGC GGGCCTGAAC GTGTTCCTCG GCCAGTTCAA GCTGCAAGCG GCTTATCAGT CGTCGCACGC GGACGGCAGC GGCGGCCCGG CCGTCAACAA CGGCATCACC GGTACCCAGC AGGTCTGGGG CGGCGTGACG TGGCAGGCCA CGCCGGCGGC CGCGCTGATC GCAGCCGTGT ACCACGTGAA TGCGAACCAC GGTGGCGGCA ACGCGAACAT CTATACGGTC GGCGGTTCGT ACAACATCTC GAAGCGCACG CTGTTCGACG TGCAGGTCGC GACGGTGCGC AACAGCTCGA CGGCCAACTT CGGCCTGAAC GCGAACGGTG CGGGCACCGC CGTATCGACG GGCAACCCGC ATCCGGGCGG CAGCCAGACC GGCGTCTACG CCGGCATCCA GCACCTGTTC TGA
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Protein sequence | MKKALVAAAL MAAGVVTAHA QSSVTLYGRL DAGLEYMNGL QDGHRYRAES GDWGTSLWGL KGSEDIGGGN KILFHLEGAF NTMNGGLGTS GSIWDRFATV GISNDRYGTL LLGRELAIAN GVWDFDPLGQ SSWSSASLVR GRNWNKTSNN VSYQSPQFYG LDFYGQFAFS NSTSFNGNTT AGQPGRAAGA QVTYTNSLFQ VRGIYDETRD SNGRFSDVFN YSREYFAGLN VFLGQFKLQA AYQSSHADGS GGPAVNNGIT GTQQVWGGVT WQATPAAALI AAVYHVNANH GGGNANIYTV GGSYNISKRT LFDVQVATVR NSSTANFGLN ANGAGTAVST GNPHPGGSQT GVYAGIQHLF
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