Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2246 |
Symbol | |
ID | 6177065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2506840 |
End bp | 2507484 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641682019 |
Product | endonuclease III |
Protein accession | YP_001808941 |
Protein GI | 172061289 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.769441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA CCAAACGACG CGCGATCTAC GAAACGCTGC AAAGCCTCAA TCCGCATCCG ACCACCGAGC TCGAATACAC GACGCCGTTC GAGTTGCTGA TCGCGGTGAT GCTGTCCGCG CAGGCGACCG ACGTGTCGGT CAACAAGGCG ATGCGCAAGA TGTTTCCGGT CGCGAACACC CCGCGACAAA TCGTCGCGCT CGGTGAAGAA GGCGTCGCCG ACTACATCAA GACGATCGGC CTGTACCGCA CCAAGGCGAA GAACGTGGTC GCCGCGTGCA AGATCCTGCT CGAGCGCTAC GACGGCGAGG TGCCGGCCGA TCGCGAAGCG CTCGAGAGCC TGCCGGGCGT CGGCCGCAAG ACCGCGAACG TCGTCCTGAA CACCGCGTTC GGCCAGCCGA CGATCGCGGT CGACACGCAT ATCTTCCGCG TCGCGAACCG CACGGGGCTT GCGCCCGGCA AGGACGTGCG GGCCGTCGAG GCCGCGCTCG AGAAGTTCAC GCCGAAGGAA TTCCTGCAGG ATGCGCATCA CTGGCTGATC CTGCACGGGC GCTACGTGTG CAAGGCCCGC AAGCCCGAAT GCTGGCACTG CGCGATCGAG CCGCTGTGCG AATTCCGGCC GAAGACGCCG CCGCCGAACG ACTGA
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Protein sequence | MNATKRRAIY ETLQSLNPHP TTELEYTTPF ELLIAVMLSA QATDVSVNKA MRKMFPVANT PRQIVALGEE GVADYIKTIG LYRTKAKNVV AACKILLERY DGEVPADREA LESLPGVGRK TANVVLNTAF GQPTIAVDTH IFRVANRTGL APGKDVRAVE AALEKFTPKE FLQDAHHWLI LHGRYVCKAR KPECWHCAIE PLCEFRPKTP PPND
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