Gene BamMC406_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2238 
SymbolpurT 
ID6177851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2492901 
End bp2494115 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content71% 
IMG OID641682011 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_001808933 
Protein GI172061281 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.335743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCG GTCAGCGGCT CGGTACGCCG CTTTCTCCCT CGGCCACGCG CGTCATGCTG 
CTCGGCGCGG GCGAACTCGG CAAGGAAGTC ATCATCGCGT TGCAGCGGCT CGGCGTCGAA
GTCGTCGCGG TCGACCGCTA TCCGGACGCG CCGGGCCACC AGGTCGCGCA TCGCGCGCAC
GTGATCGACA TGACCGACGC CGCCGCGCTG CGCGCGGTCG TCGAGGCCGA GCGTCCGCAC
CTGATCGTGC CGGAGATCGA GGCGATCGCG ACCGACGCGC TCGCCGCGAT CGAGGCCGCC
GGCCTGGCCG AGGTGATCCC CACCGCGCGC GCGACGCAGC TCACGATGAA CCGCGAAGGC
ATCCGCCGGC TCGCGGCCGA GGAGCTCGGG CTCGCGACGT CGCCGTACGC TTTCGCGGAT
TCGTTCGACG CATTCAGCGC GGCCGTCGCG AAGATCGGCA TGCCGTGCGT CGTGAAGCCC
GTGATGTCGT CGTCGGGCAA GGGGCAGTCG GTCGTGCGGA CCGAAGCCGA CGTGAAGCCC
GCGTGGGATT ACGCGATGGC GGGCGGCCGC GTGAACCACG GCCGCGTGAT CGTCGAGGGC
TTCATCGATT TCGAATACGA GATCACGCAG CTGACCGTGC GCGCGATCGA TCCGGCGACG
CTCGAGACGC GCACCTACTT CTGCGAGCCG GTCGGCCACG TGCAGGTGGC GGGCGACTAC
GTCGAATCGT GGCAGCCGCA GCCGATGAGC GCGCTCGCGC TGAAAAAGTC GCGCGAGATC
GCGCACAAGG TGACCGAGGC GCTCGGCGGG CGCGGATTGT TCGGCGTCGA GCTGTTCGTG
CGCGGCGACG ACGTCTGGTT CTCCGAGGTG AGCCCGCGGC CGCACGACAC CGGCCTCGTC
ACGCTCGCGT CGCAGCGCCA GTCGGAGTTC GAGCTGCACG CGCGCGCGAT TCTCGGGCTG
CCGGTCGATC CGACGCTCGG TTCGCCGGCC GCGTCGGCGG TGATCTACGG GGGGCTCGAC
GAGCGCGGCA TCGCGTTCGA GGGCGTGCGC GACGCGCTCG CCGTGCCGGG CGCCGACCTG
CGCCTGTTCG GCAAACCGGA AAGCTTTGCG AAGCGGCGCA TGGGTGTCGC ACTCGCGATC
GGCGCGAGCG TCGACGAAGC CCGCGAACGC GCGAAGCGTG CCGCGGCGGC CGTGCGGCCC
GTGTCGGCGC GCTGA
 
Protein sequence
MQIGQRLGTP LSPSATRVML LGAGELGKEV IIALQRLGVE VVAVDRYPDA PGHQVAHRAH 
VIDMTDAAAL RAVVEAERPH LIVPEIEAIA TDALAAIEAA GLAEVIPTAR ATQLTMNREG
IRRLAAEELG LATSPYAFAD SFDAFSAAVA KIGMPCVVKP VMSSSGKGQS VVRTEADVKP
AWDYAMAGGR VNHGRVIVEG FIDFEYEITQ LTVRAIDPAT LETRTYFCEP VGHVQVAGDY
VESWQPQPMS ALALKKSREI AHKVTEALGG RGLFGVELFV RGDDVWFSEV SPRPHDTGLV
TLASQRQSEF ELHARAILGL PVDPTLGSPA ASAVIYGGLD ERGIAFEGVR DALAVPGADL
RLFGKPESFA KRRMGVALAI GASVDEARER AKRAAAAVRP VSAR