| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2218 |
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| Symbol | |
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| ID | 6178021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2469210 |
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| End bp | 2470679 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641681991 |
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| Product | ribonuclease |
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| Protein accession | YP_001808913 |
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| Protein GI | 172061261 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.513685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAG AAATCCTGAT CAACCTCACG CCCCAGGAAA CACGGGTCGC ACTCGTCCAG
CAAGGCGCGG TGCAGGAACT TCACGTCGAG CGCACGCTGT CGCGCGGGCG GGTCGGCAAC
ATCTACCTCG GCAAGGTCGT GCGGGTGCTG CCCGGCATGC AGTCGGCGTT CATTGACATC
GGCCTGGAGC GCGCGGCGTT CCTGCACGTC GCGGACATCT GGCATCCGCG GCTCGCCGGC
GAGCCGCAGT CGGGCGCGCC GCACCAGCCG ATCGAGAAGA TCGTGTTCGA AGGCCAGACG
CTGATGGTCC AGGTGATCAA GGATCCGATC GGCACGAAGG GCGCGCGACT GTCGACGCAG
GTCAGCATCG CGGGCCGCAC GCTCGTGTAT CTGCCGCAGG AGCCGCACAT CGGCATCTCG
CAGAAGATCG AGAGCGAAGC CGAGCGCGAG GCCGTGCGCG CACGCCTGAC CGCCGTGATC
CCGCCGGACG AGAAAGGCGG CTACATCGTG CGCACGATCG CCGAGGATGC GACCTCCGAG
GAGCTGGCCG GCGACGTCAC GTACCTGCGC AAGACCTGGG CGACGATCGT CGCGCAGGCG
CAGCGGCTGC CGGCGACGAG CCTGCTGTAC CAGGATCTCG ACCTCGCGCA GCGCGTGCTG
CGCGATTTCT CGAACGACGA CACGACGCGC ATCCAGGTCG ATTCGCGCGA GACGTACCAG
CGCCTCGCGG AATTCGCGGA CGAGTTCACG CCGGCGGTGA GTCCGAAGCT GCATCACTAC
ACCGGCGAGC GGCCGCTGTT CGACCTGTAC AACATCGAGA CGGAGATCCA GCGCGCGCTG
TCGCGCCGCG TCGACCTGAA GTCGGGCGGC TACCTGATGA TCGACCAGAC CGAGGCGATG
ACGACGATCG ACGTGAACAC CGGCGGCTAC GTCGGCGCAC GCAACTTCGA CGACACGATC
TTCAAGACCA ACCTCGAGGC CGCGCACACG ATCGCGCGGC AATTGCGGCT GCGCAATCTC
GGCGGGATCA TCATCATCGA CTTCATCGAC ATGGAGAACG CCGAGCATCG CGACGCGGTG
CTGTCGGAGC TGAAGAAGGC ACTGTCGCGC GACCGCACGC GCGTGACGGT CAACGGCTTC
TCGCAGCTCG GGCTCGTCGA GATGACGCGC AAGCGCACGC GCGAATCGCT CGCGCACGTG
CTGTGCGAGC CGTGCCCGAC CTGCCAGGGC AAGGGCCAGG TGAAGACGTC GCGCACCGTG
TGCTACGACA TCCTGCGCGA GATCCTGCGC GAGTCGCGCC AGTTCAATCC GCGCGAATTC
CGCGTGATCG CCGCGCAGCA GGTGATCGAC CTGTTCCTCG ACGAGGAGTC CCAGCATCTC
GCGATGCTGA TCGACTTCAT CGGCAAGCCG GTGTCGCTGC AGGTCGAGTC GAACCTCAGC
CAGGAGCAGT ACGATATCGT GCTGATGTGA
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| Protein sequence | MNEEILINLT PQETRVALVQ QGAVQELHVE RTLSRGRVGN IYLGKVVRVL PGMQSAFIDI
GLERAAFLHV ADIWHPRLAG EPQSGAPHQP IEKIVFEGQT LMVQVIKDPI GTKGARLSTQ
VSIAGRTLVY LPQEPHIGIS QKIESEAERE AVRARLTAVI PPDEKGGYIV RTIAEDATSE
ELAGDVTYLR KTWATIVAQA QRLPATSLLY QDLDLAQRVL RDFSNDDTTR IQVDSRETYQ
RLAEFADEFT PAVSPKLHHY TGERPLFDLY NIETEIQRAL SRRVDLKSGG YLMIDQTEAM
TTIDVNTGGY VGARNFDDTI FKTNLEAAHT IARQLRLRNL GGIIIIDFID MENAEHRDAV
LSELKKALSR DRTRVTVNGF SQLGLVEMTR KRTRESLAHV LCEPCPTCQG KGQVKTSRTV
CYDILREILR ESRQFNPREF RVIAAQQVID LFLDEESQHL AMLIDFIGKP VSLQVESNLS
QEQYDIVLM
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